| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3406 |
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| Symbol | hemE |
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| ID | 5078028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3965776 |
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| End bp | 3966840 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640500606 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_001184916 |
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| Protein GI | 146294492 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGAAT TAAAGAATGA TCGTTATTTA CGCGCCCTAC TAAAACAGCC TGTCGATATG
ACCCCCGTTT GGATGATGCG TCAAGCTGGC CGTTATCTCC CTGAATATAA AGCGACTCGC
GCACAAGCGG GTGACTTTAT GTCTCTATGT AAAAACCACG AATTAGCTTG TGAAGTGACT
TTGCAGCCAT TGCGTCGTTA TGAACTTGAT GCTGCTATTC TATTTTCCGA TATTCTGACA
GTGCCTGATG CTATGGGCTT AGGTCTGTAT TTTGAGGCGG GTGAAGGTCC ACGTTTTGAG
CGCCCCACAG ACACTATCGA TGCGATTAAA AAGCTTTCAA TCCCAGATCC TGAGGATGAA
CTCGGTTATG TGATGAAGGC TGTGAGCACG ATTCGCCGTG AGTTAAATGG TGCCGTGCCA
TTAATTGGTT TCTCTGGTTC ACCTTGGACG CTTGCGACTT ATATGGTAGA AGGTGGTTCA
AGTAAAACCT TCGAAAAAAT CAAGAAGATG GCCTACGCCG AGCCTGCTGC ATTGCATATG
TTGCTTGATA AGTTAGCTGA TTCTGTAATT TTGTATTTGA ATGCTCAAGT GGCTAACGGT
GCCCAGTCAT TAATGATTTT TGACTCATGG GGTGGTGCGT TATCGCACAC GGCTTATCGT
GAATTCTCAT TGCGCTATAT GCAGAAAATT GTTGATGGCC TGACTCGTTT CGCCGATGGT
CGCCAAGTCC CTGTCACACT ATTCACTAAG GGCGGCGGTC TATGGTTAGA AGCCATGGCT
GAAACCGGTT GTGATGCTTT AGGCTTAGAT TGGACAGTTG ATATTGCCGA TGCTCGTCGC
CGTGTCGGTC ATAAAGTGGC ACTGCAAGGC AATATGGATC CATCCATGTT ATATGCGCCA
ATTCCACGTA TCGAAGAAGA AGTGAGCCAA ATCTTAGCGG GTTACGGTGA AGGAACTGGC
CATGTGTTCA ACTTAGGGCA TGGTATCCAT CAACATGTGG ATCCTGAACA TGCTGGTGCT
TTTATTAAAG CTGTACATGC ACAATCAAAA CAATACCATA AGTAA
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| Protein sequence | MAELKNDRYL RALLKQPVDM TPVWMMRQAG RYLPEYKATR AQAGDFMSLC KNHELACEVT
LQPLRRYELD AAILFSDILT VPDAMGLGLY FEAGEGPRFE RPTDTIDAIK KLSIPDPEDE
LGYVMKAVST IRRELNGAVP LIGFSGSPWT LATYMVEGGS SKTFEKIKKM AYAEPAALHM
LLDKLADSVI LYLNAQVANG AQSLMIFDSW GGALSHTAYR EFSLRYMQKI VDGLTRFADG
RQVPVTLFTK GGGLWLEAMA ETGCDALGLD WTVDIADARR RVGHKVALQG NMDPSMLYAP
IPRIEEEVSQ ILAGYGEGTG HVFNLGHGIH QHVDPEHAGA FIKAVHAQSK QYHK
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