Gene Sputcn32_3399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3399 
Symbol 
ID5078021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp3956291 
End bp3957778 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content51% 
IMG OID640500599 
Productpermease 
Protein accessionYP_001184909 
Protein GI146294485 
COG category[R] General function prediction only 
COG ID[COG0701] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTACTGA AGAATTTTAT CGATCTGTTT TTAGACTCTG CGCCTTGGTT GTTACTGGGC 
TTGATTTTGG CGGGGTTATT AAAAGTATTT GTGCCTATGG CGTGGATGCA AAAACAGCTC
GGCGGACATG GTTTTAAAAC CGTGGTAAAG GCAGCGTTAT TGGGCGCGCC TTTACCTCTG
TGTTCCTGCG GCGTTATCCC CGCGGCTGTC GGGCTGCGCC GCTCAGGGGC ATCTAAGGCG
GCAACGACTT CCTTTTTAGT CTCCACCCCT GAAACGGGCG TCGATTCGGT GACCGTTTCC
TACGTGTTAC TCGGCCCTTT TATGGCGATA GTGCGCCCAA TTGCGGCGAT CACTAGCGCC
ATTGTCGCGG GTTTATTGGT TGGCCGTGAT GATGACGATA GCAAGTCAGT GGTTAAGGTA
GAAACTCAAT CAGATAAGCC ATTAGAGGGT GTGGCGTCTT GCTGCGCCTC AAAATCAGTG
GCTCAGCCAG AGATGGTACA AGCCGAAGCG GTTAAAAGCT GCTGCTCATC GACTACGCCT
GCGATAACGC CCGTAAAGTC TTCCTGCTGT GGTAATGACG GTGTTGATGC ACCTGCAGCC
GAGCCAAAGC CGAAGATCAA AATGACGCCT ATGGCGGCAC CGAGCTTAAT GGCGGGGTCT
TCAAGTGTTA TGGCTGTTGG CGGTCAAACC ATGGGATCTG TTCAGACTAT GGGTTCTGTG
GTCAAGGTTA ACGCTGCTAA AGCAAAAAGC GCGGGTTCAT GCTGTGGCAG CCAAACCACA
GAGTCTGAAC AAATAGTCGT AGTGAAAAAA GGCGCCTGCT GCGGCAGTGC AAGCGCGCAA
ACGAATGACA AGCCTGATGG CGAAAGCTGC TGCGCATCAA CCCAAGATAT GGCGACTGAG
TTGAAGTCTG AATCGGTATT AAGCCGTGTC GGTATTGGCC TTAAATATGC GGCAACGGAT
TTAGTGCGTG ATACCACATT ATGGTTATTA GTGGGCTTAT TCTTTGCGGC CTTAGTACAA
ACCTATGTGC CCGCTGACTT TTTGGCGAAA TGGGGCGATG GTATCCTGGC GATGCTGGTG
ATGGTGTTGG TTTCAGTGCC TATGTACATT TGTGCCACTG CATCGACACC GATTGCTGCT
GGATTATTAC TGGCTGGCGT GTCACCGGGC GCAGTTTTAG TGTTTATGAT GGCGGGCCCC
GCAACCAATA TTGCGACTTT GGGGGTGGTT GGTAAAGAGC TTGGTAAACG TGCGCTGTGG
GGATATCTTG GCGGCGTACT TGGCGTGGCT CTAGTTGCGG GTATGTTAGT CAATTATCTG
GTTGATACTT TTGGCTTTGT GGTGATGCCG CAAATTGGTG AAGAACATCA GATGTTGCCT
GAGTGGTTGG TTGCCATATC GGGAATAGTC CTTGCATTGT TAATGGCTAA AGTCGTATTT
GAGAAAATTC CCCGTAGTTG GCTACGTCGC AGCGATTGCT GTTCTTAA
 
Protein sequence
MLLKNFIDLF LDSAPWLLLG LILAGLLKVF VPMAWMQKQL GGHGFKTVVK AALLGAPLPL 
CSCGVIPAAV GLRRSGASKA ATTSFLVSTP ETGVDSVTVS YVLLGPFMAI VRPIAAITSA
IVAGLLVGRD DDDSKSVVKV ETQSDKPLEG VASCCASKSV AQPEMVQAEA VKSCCSSTTP
AITPVKSSCC GNDGVDAPAA EPKPKIKMTP MAAPSLMAGS SSVMAVGGQT MGSVQTMGSV
VKVNAAKAKS AGSCCGSQTT ESEQIVVVKK GACCGSASAQ TNDKPDGESC CASTQDMATE
LKSESVLSRV GIGLKYAATD LVRDTTLWLL VGLFFAALVQ TYVPADFLAK WGDGILAMLV
MVLVSVPMYI CATASTPIAA GLLLAGVSPG AVLVFMMAGP ATNIATLGVV GKELGKRALW
GYLGGVLGVA LVAGMLVNYL VDTFGFVVMP QIGEEHQMLP EWLVAISGIV LALLMAKVVF
EKIPRSWLRR SDCCS