Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3399 |
Symbol | |
ID | 5078021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3956291 |
End bp | 3957778 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640500599 |
Product | permease |
Protein accession | YP_001184909 |
Protein GI | 146294485 |
COG category | [R] General function prediction only |
COG ID | [COG0701] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTACTGA AGAATTTTAT CGATCTGTTT TTAGACTCTG CGCCTTGGTT GTTACTGGGC TTGATTTTGG CGGGGTTATT AAAAGTATTT GTGCCTATGG CGTGGATGCA AAAACAGCTC GGCGGACATG GTTTTAAAAC CGTGGTAAAG GCAGCGTTAT TGGGCGCGCC TTTACCTCTG TGTTCCTGCG GCGTTATCCC CGCGGCTGTC GGGCTGCGCC GCTCAGGGGC ATCTAAGGCG GCAACGACTT CCTTTTTAGT CTCCACCCCT GAAACGGGCG TCGATTCGGT GACCGTTTCC TACGTGTTAC TCGGCCCTTT TATGGCGATA GTGCGCCCAA TTGCGGCGAT CACTAGCGCC ATTGTCGCGG GTTTATTGGT TGGCCGTGAT GATGACGATA GCAAGTCAGT GGTTAAGGTA GAAACTCAAT CAGATAAGCC ATTAGAGGGT GTGGCGTCTT GCTGCGCCTC AAAATCAGTG GCTCAGCCAG AGATGGTACA AGCCGAAGCG GTTAAAAGCT GCTGCTCATC GACTACGCCT GCGATAACGC CCGTAAAGTC TTCCTGCTGT GGTAATGACG GTGTTGATGC ACCTGCAGCC GAGCCAAAGC CGAAGATCAA AATGACGCCT ATGGCGGCAC CGAGCTTAAT GGCGGGGTCT TCAAGTGTTA TGGCTGTTGG CGGTCAAACC ATGGGATCTG TTCAGACTAT GGGTTCTGTG GTCAAGGTTA ACGCTGCTAA AGCAAAAAGC GCGGGTTCAT GCTGTGGCAG CCAAACCACA GAGTCTGAAC AAATAGTCGT AGTGAAAAAA GGCGCCTGCT GCGGCAGTGC AAGCGCGCAA ACGAATGACA AGCCTGATGG CGAAAGCTGC TGCGCATCAA CCCAAGATAT GGCGACTGAG TTGAAGTCTG AATCGGTATT AAGCCGTGTC GGTATTGGCC TTAAATATGC GGCAACGGAT TTAGTGCGTG ATACCACATT ATGGTTATTA GTGGGCTTAT TCTTTGCGGC CTTAGTACAA ACCTATGTGC CCGCTGACTT TTTGGCGAAA TGGGGCGATG GTATCCTGGC GATGCTGGTG ATGGTGTTGG TTTCAGTGCC TATGTACATT TGTGCCACTG CATCGACACC GATTGCTGCT GGATTATTAC TGGCTGGCGT GTCACCGGGC GCAGTTTTAG TGTTTATGAT GGCGGGCCCC GCAACCAATA TTGCGACTTT GGGGGTGGTT GGTAAAGAGC TTGGTAAACG TGCGCTGTGG GGATATCTTG GCGGCGTACT TGGCGTGGCT CTAGTTGCGG GTATGTTAGT CAATTATCTG GTTGATACTT TTGGCTTTGT GGTGATGCCG CAAATTGGTG AAGAACATCA GATGTTGCCT GAGTGGTTGG TTGCCATATC GGGAATAGTC CTTGCATTGT TAATGGCTAA AGTCGTATTT GAGAAAATTC CCCGTAGTTG GCTACGTCGC AGCGATTGCT GTTCTTAA
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Protein sequence | MLLKNFIDLF LDSAPWLLLG LILAGLLKVF VPMAWMQKQL GGHGFKTVVK AALLGAPLPL CSCGVIPAAV GLRRSGASKA ATTSFLVSTP ETGVDSVTVS YVLLGPFMAI VRPIAAITSA IVAGLLVGRD DDDSKSVVKV ETQSDKPLEG VASCCASKSV AQPEMVQAEA VKSCCSSTTP AITPVKSSCC GNDGVDAPAA EPKPKIKMTP MAAPSLMAGS SSVMAVGGQT MGSVQTMGSV VKVNAAKAKS AGSCCGSQTT ESEQIVVVKK GACCGSASAQ TNDKPDGESC CASTQDMATE LKSESVLSRV GIGLKYAATD LVRDTTLWLL VGLFFAALVQ TYVPADFLAK WGDGILAMLV MVLVSVPMYI CATASTPIAA GLLLAGVSPG AVLVFMMAGP ATNIATLGVV GKELGKRALW GYLGGVLGVA LVAGMLVNYL VDTFGFVVMP QIGEEHQMLP EWLVAISGIV LALLMAKVVF EKIPRSWLRR SDCCS
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