Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3386 |
Symbol | |
ID | 5078008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 3942003 |
End bp | 3943739 |
Gene Length | 1737 bp |
Protein Length | 578 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640500586 |
Product | tannase and feruloyl esterase |
Protein accession | YP_001184896 |
Protein GI | 146294472 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.866711 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAAA AGAATTTATT ACTGATTCCA GCCGTAACTA TTTCTTGTTT TTTATTTGGT GGGTGTGGAA ATAACGATAA TGCCGAAATC TCCATACCAC AATTAACCCC TGCGAAAACA GGAACACTGA ATATATGCAA TGAGATAGCT GCACAATATC ATTTCAAAAA TACCGTCATC ACTGACTCAA AAATGATTGC GGCTGGCAAT GTTGAATATA ACGCGACTGA AAGTTATCGC GCTCCAGAAC ATTGTTTAGT CAAAGGCTAT ATGAATGAAA GGATAGGAAC GGGTATCGCG GGTGATACTC GCTATGCGAT TGGCTTTGAA ATGCGTTTAC CCACTAACTG GAATGGCCGA TTCTATTATC AAGCCAATGG TGGCCTCGAT GGTTCAGTCG CCAAAGCGGT GGGTAGATTG CTCTTCTCTG GAGGCCCAGA TTCAGCGGCA CTGAATGAAG GTTTTGCCGT AATAAGTTCA GATATGGGCC ACCCCGCCCC TACACCACAT TTTGGCCTAG ATCCCCAAGC AAGGCAGGAT TATGGCTATA ATGCCGTAGC CGAATTAACA CCAATGGCGA AAAATCTAAT TGAGAAAGCC TATGGTAAAC AACCTGATAG ATCATACTTC GCAGGTTGTT CTAACGGCGG TAGACACACT ATGGTTGCCG CAAGCCGTTA TGCCGATATG TATGATGGCT TCCTTGTTGG AAATCCAGGC TTTAATTTAC CCCAGTCCGC CGTTGCTCAA TTGTACGGGA TCCAAGAATA TTCAAAACTG GTTGAGTTTG ATGGCGCAGA TATTTTAGCC ACACTGCAAA AGGCAATTAC GCCTGAAGAA TTTTCACTCG TTTCTCAAAA AGTCTTAGAA CAGTGTGATG CCCTCGATGG GCTCAATGAT GGAATGATTG CAAATACCTA TGCTTGCCAA AAAGCATTTG ATCTCGAAAG GGATATTCCA ACCTGCTCAA ATCTGAGGGA CAACACTTGT TTAACCGCCG AGCAAAAGCA GGTTCTAGGC AATATAATGG CAGGCCCGCA CAATAGCAAA ACGGGTGAAG CCATTTATGC TGATTTTCCC TATGATGCTG GGATAGGAGC TAAAGATTGG GCCAATTGGG AATACTCTAT GGCGCTAACT AGAGACTCTG GTGCTGTAGG GTTTATTTTT AGCTCACCGC CAACCCCTTT TAATGGTGAA AGTGAACAAT CCAGTTTGGA TTTTATCCAG TCATTTAGCA TGGATGATGA TGCACAAAGA ATTTATGCAA CCGATTCCAT TTACGCTGAA TCTGGCGTTG ATTTTATGAC ACCACCTCAC CCAACAGACC TGACGACACT CAAAAATCGT GGCGCTAAGA TGATGATTTT CCATGGCACA TCAGATCCTG TATTTTCAGT AAATGATACC GTGAACTGGT ATAACGACTT AGGAAATGCG AATGCTGGAC ACGCGCAGAC CTTCGCCCGC TTATTTCTAA TCCCTGGTAT GAATCATTGC GGAAAAGGCC CAACAACCGA TAAATTTAAT ATGGTGCGTG CATTGGTCGA TTGGGTTGAA AAAGGCGTAG AACCGCAAAG TATCACCGCG GCAGTGCGTG CAGAAAATAC TGAATTGCCT AGTGATTGGT CGAAAAGCAG GACTCGAGTC TTATGTCCCT ACCCCCAATT CGCAAAATAT AACGGCATAG GTAATATTGA AGATGCCGCT AACTTTACCT GTGTAACACC TGAATAA
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Protein sequence | MEKKNLLLIP AVTISCFLFG GCGNNDNAEI SIPQLTPAKT GTLNICNEIA AQYHFKNTVI TDSKMIAAGN VEYNATESYR APEHCLVKGY MNERIGTGIA GDTRYAIGFE MRLPTNWNGR FYYQANGGLD GSVAKAVGRL LFSGGPDSAA LNEGFAVISS DMGHPAPTPH FGLDPQARQD YGYNAVAELT PMAKNLIEKA YGKQPDRSYF AGCSNGGRHT MVAASRYADM YDGFLVGNPG FNLPQSAVAQ LYGIQEYSKL VEFDGADILA TLQKAITPEE FSLVSQKVLE QCDALDGLND GMIANTYACQ KAFDLERDIP TCSNLRDNTC LTAEQKQVLG NIMAGPHNSK TGEAIYADFP YDAGIGAKDW ANWEYSMALT RDSGAVGFIF SSPPTPFNGE SEQSSLDFIQ SFSMDDDAQR IYATDSIYAE SGVDFMTPPH PTDLTTLKNR GAKMMIFHGT SDPVFSVNDT VNWYNDLGNA NAGHAQTFAR LFLIPGMNHC GKGPTTDKFN MVRALVDWVE KGVEPQSITA AVRAENTELP SDWSKSRTRV LCPYPQFAKY NGIGNIEDAA NFTCVTPE
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