Gene Sputcn32_3378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3378 
Symbol 
ID5078000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp3933082 
End bp3933519 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content48% 
IMG OID640500578 
ProductNUDIX hydrolase 
Protein accessionYP_001184888 
Protein GI146294464 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCTTTA ACGATACCTT TAGATTGAGC AGCCACGCGG TTATTACCAA TGCGCTGGGA 
CAAGTGCTGT TGCTTAAGGC CAATTACGGT AATTTTGCTT GGGGTTTACC CGGCGGCGCA 
CTCGAACCAG GCGAAACGAT TCACGAGGCC TTGGTGCGTG AATGCCAAGA GGAATTAGGC 
TTAAGTGTGC GGGTGAACTA TTTGAGCGGT GTGTATTATC ACAGCGCTTA TCAGTCCCAA 
GCCTTTATTT TTCGATGCGA ATTACTGTTG CCTGAAGTGG CAAAAGATGG GGTAGAAGAC 
GAGCTATTGC CGATCCAATT AAGTCACGAA CACTCAGCGT TCGCCTTCCA CGATATCGAC 
ACCCTTAGCA CGGTTCAGCA GCAAAGAATT AAAGATTGCC TCAATTTCAA CGGGGTTGTG 
GTGAGTGCCA AGTTCTAA
 
Protein sequence
MAFNDTFRLS SHAVITNALG QVLLLKANYG NFAWGLPGGA LEPGETIHEA LVRECQEELG 
LSVRVNYLSG VYYHSAYQSQ AFIFRCELLL PEVAKDGVED ELLPIQLSHE HSAFAFHDID 
TLSTVQQQRI KDCLNFNGVV VSAKF