| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3376 |
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| Symbol | |
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| ID | 5077998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 3928641 |
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| End bp | 3931274 |
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| Gene Length | 2634 bp |
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| Protein Length | 877 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640500576 |
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| Product | helicase domain-containing protein |
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| Protein accession | YP_001184886 |
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| Protein GI | 146294462 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGGCAA TTGATGACCT CTATTCGTTT GGTGAAGGGG TTATTATTCA AAGTCGAAGT
GCTAATGGTA CTACACAGCA TTTGGTTGAG TTTCCAGAAA GCAACGAGAG GCGCTGGCTT
CCCTATTTTG CCTTAAGACA AATCAAAGGG GTAAAACATG CATATGTCGT TGGTTCTCAA
TCAGAAGGAA ATGTAGCAGA ACGTTTTCGG TTGAAAACTT TGGCCCATGC GTTGCGCAAT
TGGAATGAAA ACACTGGTGC ACTTTCTAGT TTAGATATTG ATCCGTTGCC GCATCAAATT
CATTTAGTGC ATCGCATCTT GAATTCAGGA AGTTTGGACT GGCTAATTGC TGATGATGTT
GGCTTAGGGA AGACAATTGA AACAGGCATG TTGCTGTATG CATTACAACA GCGAGGACAA
GCCAAAAGAA TTTTGCTTAT TACTCCTGCT GGTCTGACTC GTCAGTGGCA GGAGGAGATG
CACGATAAGT TTGGATTGGG AGATTTTCAA ATATATGGTC ATAGTTTCCA TATTCATGAG
CCTCGTGAAT GGAAAATGCA CGACCATGTA ATTGCATCCA TTGATAAGTT GAAACAAGAG
TCACACTTGG AATTGCTCCT ACAAGCGGAC GCTTGGGATC TGGTGGTGTT TGATGAGGCG
CATCGGCTTT CTCGTCGGCA ATATGGTCTT CACTATGACA CTTCTGAACG TTTTAATTTG
GCGCATAGTT TGAGAAGATC AAAAAAGGCT CGCTCGATAC TACTGCTAAC AGCAACACCT
CACCAAGGCA TGCAGGATAA GTTCATTTCT TTACTTGAGT TGTTAAGACC AGATAGAAAG
AACGAATTTG CTTTGCTTTC ATTAAAACCT GTATTGCTTC AGGACATGGT AATACGGAAC
TACAAGGCCG ATGTTACTGA CGCTGAAGGA AACTTCGTAT TCCACGGCAA ATCAACCATT
GCTTTAGAAG TGCCAGTCAA TCAGCAATCT ATTGATTTTG ATCAGGCGCT GCAAGATTAC
TTACGCAAAG GCTATCAAGC GGGAAAAAAT AAGGGCTATT CGGGGAATGC GATTGGCTTT
GTAATGACGG TTTATCGAAA GCTTGCAGCG TCAAGTGTTG CAGCTATCCG AAGGGCACTA
TATCGCCGAC TTAGCCGATT AGAAAACGAT GTTTTAGATG AAATTATTCA GTCTAATTTT
GTCGAAGATG AACGTTTTCA AGGTGAATTA GAAGAGTTTA CAGTTAGTTC TGACCAAGAT
AGTCGTGAAG AGTTCTTTGA TGGTGAGATT GAGCTTCTAA AATTACTGAT CACTAGAGTT
GAAAAGTTAA TAAATCATGA TGACAAACTA TCGCGCTTTA TGGATACGTT GTTAAAGCAG
CTTCTCAAAG ATAATCCGAA TGAAAAAATT CTAATTTTCT CAGAATACAG AGCAACCCAA
GAATACATCA AAGAAGCTAT CACAGGTCAG TTTGGTGAAG ATAAAGTTGT GCTATTGCAT
GGTGGTATGT CTCATGATGA AAGACGAGAC GTTATCTGGC AGTTTGATAA TGAAGTGCAA
TTCTTAATCT CAACTGAGGC GGGTGGCGAA GGTATTAACC TGCAGCAACA TTGTCACACC
ATGGTCAACT ATGATTTGCC ATGGAACCCA ATGCGACTTG TTCAACGAAT AGGCCGTTTG
TATCGATATG GTCAGCAGAA GAAAGTCGTT GTGCTTAACG TAAACTCACC GGGAACTGTT
GATGAACAAA TTATCGCTTT AATGTATCAG CGTATTGAAC AGGTTGTTAG TGACATGGCT
GCAGTGCAAG GTGATGAATT TAATGAGGCG TTAAAAGACG ACATTCTCGG TGAAGTCTCT
AATCTTTTGG ACCTAGAGGA AATTCTTGAG CAAGCTTCTG CTGGTGGAAT TGAACGCACT
GAGGAAAGGA TTAAAGAAGC ACTTGAACGT GCGAAAAATG CGACAAATTT ACAGCGTGAT
CTATTTAAAT ACGTTTCGCG CTATAACCCT GAAGATTTAG CAAATGAATT AATAATAACA
ACAGCTCATC AACTGTCGTT TATTGAAGGA ATGTGCAAGC AGTTAAATAT CGAAATAGTT
AAGCGGATAC ATGATGACAA GGTACTCCAA TTGAGGTTAC CAGATAGCGT CATGAATGAG
TTAGGAACTC GATCCAGTGC CCTCGATATT ACTGTATACC GCGATATGGC AAGAAGTCGC
AAGAGCACGG TAATGATGGA TATGAACGCG TCTTTAATGC AGCTATTTGT TCGAACAGCA
TGTAGTTTTA GCTTCGGAGG TAAGACAGCA TCCGTTTGTG CTCGCAATTT AAGTGGTGAA
TCGTTTATTA CCGCAAATTT GAGATGGCAA GATGTTTATG GAAGACGCAT GAAACAAGAT
TTTGCAGCCT TCTTTATTCA GGGTGGGCGA GTTTATCAGA ATCCTAAAAT CCTAGGTGAC
TGGTTTTTAG AAGAAGCTGA GACTAGCAAC GTTATCCCCA CCAGAGACGT AAATGAACAG
TGGTTTCAAT TGGTCGAGCG AGCAGCACAT AAAGTACTTA ACACCTCATC TGAAATCAAT
ATGATACCGG ATCATGTGGA TTGGGTTAGT GGAGCATGGT TGGATAATAA ATAG
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| Protein sequence | MLAIDDLYSF GEGVIIQSRS ANGTTQHLVE FPESNERRWL PYFALRQIKG VKHAYVVGSQ
SEGNVAERFR LKTLAHALRN WNENTGALSS LDIDPLPHQI HLVHRILNSG SLDWLIADDV
GLGKTIETGM LLYALQQRGQ AKRILLITPA GLTRQWQEEM HDKFGLGDFQ IYGHSFHIHE
PREWKMHDHV IASIDKLKQE SHLELLLQAD AWDLVVFDEA HRLSRRQYGL HYDTSERFNL
AHSLRRSKKA RSILLLTATP HQGMQDKFIS LLELLRPDRK NEFALLSLKP VLLQDMVIRN
YKADVTDAEG NFVFHGKSTI ALEVPVNQQS IDFDQALQDY LRKGYQAGKN KGYSGNAIGF
VMTVYRKLAA SSVAAIRRAL YRRLSRLEND VLDEIIQSNF VEDERFQGEL EEFTVSSDQD
SREEFFDGEI ELLKLLITRV EKLINHDDKL SRFMDTLLKQ LLKDNPNEKI LIFSEYRATQ
EYIKEAITGQ FGEDKVVLLH GGMSHDERRD VIWQFDNEVQ FLISTEAGGE GINLQQHCHT
MVNYDLPWNP MRLVQRIGRL YRYGQQKKVV VLNVNSPGTV DEQIIALMYQ RIEQVVSDMA
AVQGDEFNEA LKDDILGEVS NLLDLEEILE QASAGGIERT EERIKEALER AKNATNLQRD
LFKYVSRYNP EDLANELIIT TAHQLSFIEG MCKQLNIEIV KRIHDDKVLQ LRLPDSVMNE
LGTRSSALDI TVYRDMARSR KSTVMMDMNA SLMQLFVRTA CSFSFGGKTA SVCARNLSGE
SFITANLRWQ DVYGRRMKQD FAAFFIQGGR VYQNPKILGD WFLEEAETSN VIPTRDVNEQ
WFQLVERAAH KVLNTSSEIN MIPDHVDWVS GAWLDNK
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