| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3373 |
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| Symbol | uvrD |
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| ID | 5077995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3923849 |
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| End bp | 3926017 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640500574 |
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| Product | DNA-dependent helicase II |
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| Protein accession | YP_001184884 |
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| Protein GI | 146294460 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01075] DNA helicase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGTAT CTTCTTTACT AGACGGCCTG AATGATAAGC AGCGCGAGGC TGTCGCGGCA
CCGCAATCTA GCATGTTAGT GTTGGCGGGC GCGGGCAGTG GTAAAACTCG GGTGTTGACC
CACCGTATTG CGTGGCTGAT GCAGGTTGAA CAGCAGAGTC CTTACTCGAT TCTTGCGGTG
ACATTTACCA ATAAAGCTGC GGCTGAGATG CGCGAGCGAG TTGAAAAAGT CGCTGGCACC
AATATGGGCC GCATGTGGAT TGGCACTTTC CATGGCTTGG CACATCGCTT GTTGCGCACT
CACTTCCAAG ATGCGGGTTT ACCGCAAAGC TTCCAAATCC TCGATTCTGA CGATCAAGTG
CGCTTGATCA AACGTATTCT TAAAAGCCTG AATTTGGATG AGAAACAATA TCCTCCACGC
CAAGCTCAGG GTTATATCAA TGGTAAAAAA GACCAAGGAT TACGCCCTAA ACATATCGAT
GCCATCGGTT TTCCCATTGA GCAAAATCTG TTAAAAATCT ATCAGGTTTA TCAAGAGTCT
TGCGACCGCG CAGGTTTAGT CGATTTTGCC GAAATCCTTT TACGTGCCCA TGAGTTATGG
CTTAATAAGC CGCATTTGTT GGCCCATTAT CAAGAACGCT TTAAGCATAT TTTGGTGGAC
GAGTTCCAAG ATACCAACGC GATCCAATAT GCGTGGATCC GCGTGCTTGC CGGTCAAACT
GCCAATGTGA TGATAGTCGG TGATGACGAC CAATCGATTT ACGGCTGGCG CGGCGCTCAG
GTTGAAAACC TGCATCGCTT CCTTCAGGAT TTTCCTACCG CAACCACCAT TCGCCTCGAG
CAAAACTATC GCTCTAAGGG GAATATTCTT AAAGCGTCCA ACGCGTTAAT CGCCAATAAC
CCCGAGCGTA TGGGCAAAGA GTTATGGACG GATGAAGCCG ATGGCGATCC AATTTCGCTC
TATTGCGCCT TTAATGAAAT GGATGAGGCG CGCTTTATTG TCGGTCGGAT AAATGATTGG
CATGAAAAGG GCGGTAACCT CAGTGATTGC GCAATTTTAT ATCGCTCGAA TGCTCAGTCG
CGGGTATTGG AAGAAGCCTT ATTACACAAA GGCTTAGCCT ATCGTATTTA CGGTGGCTTA
CGCTTTTTCG AGCGTCAAGA AATTAAAGAT GCCATGGGCT ATATGCGCCT CATCAGTAAT
AAAAATGATG ATGCCGCCTT CGAGCGGGTG GTGAATACGC CGCCCCGTGG TATAGGCGAT
CGCACCTTAG ATATTTTACG CACTACGGCG CGCCAACAAG AGCTTACGTT ATGGCAAGCG
TGTTTAAGGC TGCTGGATGA AAAAGTACTT GCCGGCCGTG CAGCCAGTGC GGTGCGTGGC
TTTATGGATT TAATCGTTAC TCTACAGGAA GATACGCAGG ATATGGCCTT GTATCGCATG
GCCGACACTG TGATCCAAGC GTCGGGCCTT AAGGCCATGT ATGAAGCCGA AAAGGGCGAG
AAAGCCCACG CTAGAATCGA AAACTTAGAA GAACTCGTCA CGGCGGCACG TACCTTTGAA
ATGCCTGAAG AGCTTGAGGA TATGGGCGAG CTTAACGCCT TTTTATCCCA TGCTGCGCTT
GAGGCGGGTG AAGGGCAGGC CGATGCCTTT ACCGATGCGG TGCAACTGAT GACGCTGCAT
TCGGCCAAAG GGCTTGAGTT TACCATGGTG TTTATGGCGG GAGTCGAGGA AGGGATTTTC
CCGAGTAAAA TGGCGCTCGA AGAGGGCGAC AGACTCGATG AAGAACGCCG TCTCTGCTAC
GTGGGCATGA CCCGCGCGAT GGAAAAACTC TACATTACCT ATGCGGAATC GCGCCGTATC
TATGGCCGGG AAGATTACGC GCGGCCGTCG CGTTTTATCA AAGAGATCCC GCCGCAATAT
GTGGATGAAA TTCGCCTTAA GGCGCAGGTT TCCACTCCCA TGGCAAATAA TCGTTTTAGC
ACTCAAAAGT CGGCAGCGGC AAATGATACG GGCTTTAATG TTGGACAGAG AGTCAATCAT
CCTAAATTTG GTGAAGGCAA GGTCACCAAC TTTGAAGGCA GCGGCGCACA GGCCAGAGTT
CAGGTTAGTT TTACCGACTT TGGCAGTAAA TGGTTAGTGG TGGCTTACGC TCGTTTAGAA
GCGCTTTAA
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| Protein sequence | MDVSSLLDGL NDKQREAVAA PQSSMLVLAG AGSGKTRVLT HRIAWLMQVE QQSPYSILAV
TFTNKAAAEM RERVEKVAGT NMGRMWIGTF HGLAHRLLRT HFQDAGLPQS FQILDSDDQV
RLIKRILKSL NLDEKQYPPR QAQGYINGKK DQGLRPKHID AIGFPIEQNL LKIYQVYQES
CDRAGLVDFA EILLRAHELW LNKPHLLAHY QERFKHILVD EFQDTNAIQY AWIRVLAGQT
ANVMIVGDDD QSIYGWRGAQ VENLHRFLQD FPTATTIRLE QNYRSKGNIL KASNALIANN
PERMGKELWT DEADGDPISL YCAFNEMDEA RFIVGRINDW HEKGGNLSDC AILYRSNAQS
RVLEEALLHK GLAYRIYGGL RFFERQEIKD AMGYMRLISN KNDDAAFERV VNTPPRGIGD
RTLDILRTTA RQQELTLWQA CLRLLDEKVL AGRAASAVRG FMDLIVTLQE DTQDMALYRM
ADTVIQASGL KAMYEAEKGE KAHARIENLE ELVTAARTFE MPEELEDMGE LNAFLSHAAL
EAGEGQADAF TDAVQLMTLH SAKGLEFTMV FMAGVEEGIF PSKMALEEGD RLDEERRLCY
VGMTRAMEKL YITYAESRRI YGREDYARPS RFIKEIPPQY VDEIRLKAQV STPMANNRFS
TQKSAAANDT GFNVGQRVNH PKFGEGKVTN FEGSGAQARV QVSFTDFGSK WLVVAYARLE
AL
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