| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3365 |
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| Symbol | |
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| ID | 5077987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 3916280 |
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| End bp | 3918409 |
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| Gene Length | 2130 bp |
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| Protein Length | 709 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640500566 |
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| Product | cytochrome c-type biogenesis protein CcmF |
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| Protein accession | YP_001184876 |
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| Protein GI | 146294452 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1138] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR00353] c-type cytochrome biogenesis protein CcmF
[TIGR03145] cytochrome c nitrate reductase biogenesis protein NrfE |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACTA TGGTTCCAGA GATTGGGCAT ATATTATTGA TCATCAGTAG CGTATTGGCA
TTATTTTCTG CAATACTACC ACTAATAGGG ATTAAACAGC ATAATGCCTA TCTGGTTGGG
TTAAGTCCGG TACTCTTTAG AACCATATTT ATCTCGGTAT TTTTTTCACT TCTTTGCTTA
ATTTATTGCT TTGTCACTGA TGACTTTTCT GTTGCTTATG TTGCAAACCA CTCGAATAGC
CAATTGGCAT TGGGCTATAA AGTGGCCGCC GTTTGGGGCA GCCATGAAGG GTCAATGCTC
TTCTGGATAT TTACGATTGC TCTTTGGGGC GCAATCATCA GTTATCACGT GAAGATAGCG
GATTGCACTC AGGATAAGGC CACCGATAGC TACCAAGACA CCCTGTATTT TGCGAGACTG
TTGGCTATTC TGGCGTTAGT GATCCTTGGT TTTAACCTAT TTTTACTCTT TACCTCTAAT
CCCTTTGCCC GTTTATTACC TAACATTCCA ATTGAAGGGC GAGATCTTAA CCCCATTTTG
CAAGACATAG GCCTCATATT ACACCCCCCC ATGCTCTTTC TTGGCTATGT AGGCCTTACG
GTTTGCTTTG CCGCAGCGTT AGCATCACTG CTCGGTGGTG GCTTTAATAC TCGCCAAATT
AACTATTTAC GACCTTGGGT ATTATTAGCG TGGGTGTTTC TCACAGGCGG CAATGCCTTT
GGATCTTGGT GGGCCTATAA CGAACTGGGT TGGGGTGGTT GGTGGTTTTG GGATCCTGTC
GAAAATGCCT CCTTTATTCC TTGGCTTGTG GCAACAGCAT TAGTGCATTC CCTCATTCTC
ACTCAACGTA CTCATGGCTT TAAACTGACG ACTTTACTGC TGTGCTTATT GGCATTTTCA
CTCAGTTTAC TCGGCAGCTT TTTGGTGCGC TCCGGCATAG TGCAATCGGT ACATGCCTTT
GCCGCCGATC CTACCCGTGG CATGTCAATC CTCTGCTTAT TAGTGATTTT TGTTGGTGCA
GGGTTACTGA TTTTTGCGCT CAAAGCGCAT CATTTAAAAC AGGATGTGAC TTTCGCGCTT
TTTAGCAAGG AAACACTGTT ACTGCTCGGG ATCGTTATCT TAGTCGTTGC CGCGTTTTCC
GTGTTACTCG GCACATTTTA CCCTTTGATC TATGAGCTAC TGGATTTAGG CACACTTTCA
GTGGGCGCCC CATATTTCAA CGCTATATTT GTCCCCCTCA CTTTCTTGCT TGTCCTGTTA
ATGGGCATTG CGCCCTTAGT GCAATGGCAA AAAGTGCAAT GGCAAAAAGT GCAATGGCAA
AAAGTGCAAT GGCAAAATGC CTCAAAGACT CGTATTACTT CCCTGCTCAT TCCTAGCCTA
ATGATATTAG CCGTCGCAGG CTGGGTAAGT TTACAAGCCG CCTCGGGCAG TAGCTTATTT
TTACTCCTTG GCACTGCCGC GGCACTTTGG TTGCTGGTGT GTTTATTGCT CACGATATTG
GTAGCCTCGG GATTGGGTAG ACGAGTATAT GCCCGTCAAT TAACCCAAAA CCGCAGTGAG
CACGGCTTAA ATCCTCCCGT TAAGTCATCA AAACAAGGGG TTGTCGCCAT GCTATTCGCC
CACTTGGGGG TGGCTATCAC TATTATAGGA GCAACATCCG TCTCCTTTTT TGAACAGGAA
GCCCTGCTAC GAATGGGGCC TGGTCAAGGT AAGCCTTTGG CGAGTTATGT CTTAGTTTAT
GAAAGCACAG AGAATGTTGA AACCAACAGC TTTACCGCCA TTCAAGCCAA TATCAGTATC
CGTGATGCAG CGAATGATGA ACGGGTTTTA GGCTATATCA CACCACAACG ACAAACCTTT
AAAAGCAACG GGATGGAAAT GTCCCACGCG GGTATCGACC ACGGTTTATG GCGGGATATT
TATGTGTCTA TGGGGCTGCA ATTAAGTGAT AACGAATACC TTATCCGTAT CAGCTATAAA
CCCCTCGCGA GTTGGATCTG GCTTGGCGCC CTATTAATGA TGCTGGGCGG GGCAATTGCC
GCTTGGCCTA CTCGCCGCTT TAGCTACCAA GCTGATTTAA CAACCTTAGT TAACCTATCC
CATCACAAAC CACAGGAGAC GCTTGCCTAA
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| Protein sequence | MTTMVPEIGH ILLIISSVLA LFSAILPLIG IKQHNAYLVG LSPVLFRTIF ISVFFSLLCL
IYCFVTDDFS VAYVANHSNS QLALGYKVAA VWGSHEGSML FWIFTIALWG AIISYHVKIA
DCTQDKATDS YQDTLYFARL LAILALVILG FNLFLLFTSN PFARLLPNIP IEGRDLNPIL
QDIGLILHPP MLFLGYVGLT VCFAAALASL LGGGFNTRQI NYLRPWVLLA WVFLTGGNAF
GSWWAYNELG WGGWWFWDPV ENASFIPWLV ATALVHSLIL TQRTHGFKLT TLLLCLLAFS
LSLLGSFLVR SGIVQSVHAF AADPTRGMSI LCLLVIFVGA GLLIFALKAH HLKQDVTFAL
FSKETLLLLG IVILVVAAFS VLLGTFYPLI YELLDLGTLS VGAPYFNAIF VPLTFLLVLL
MGIAPLVQWQ KVQWQKVQWQ KVQWQNASKT RITSLLIPSL MILAVAGWVS LQAASGSSLF
LLLGTAAALW LLVCLLLTIL VASGLGRRVY ARQLTQNRSE HGLNPPVKSS KQGVVAMLFA
HLGVAITIIG ATSVSFFEQE ALLRMGPGQG KPLASYVLVY ESTENVETNS FTAIQANISI
RDAANDERVL GYITPQRQTF KSNGMEMSHA GIDHGLWRDI YVSMGLQLSD NEYLIRISYK
PLASWIWLGA LLMMLGGAIA AWPTRRFSYQ ADLTTLVNLS HHKPQETLA
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