Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3355 |
Symbol | |
ID | 5078130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3905579 |
End bp | 3906211 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640500556 |
Product | flavoprotein oxygenase |
Protein accession | YP_001184866 |
Protein GI | 146294442 |
COG category | [R] General function prediction only |
COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.522125 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAACG CTGACCTTCG CTATTTTTAT GAACCCCAAA AGGGCCATGG ATTACCCCAT GATCCTTTAA ATGCCATTAT TGCTCCCCGT CCAATCGGTT GGATCTCATC ACGCAGTGCA GCAGGACAGC GCAATCTCGC GCCTTACAGT TTTTTCAATT GTTTCAACTA CAAACCGCCC ATCATCGGTT TTGCCAGCAC AGGCTGGAAA GACAGTGTCG CTAATATTAT CGAGACTGGG GAGTTTGTGT GGAACCTCAC CACTCGCAGC CTTGCCGAGC AGATGAATCA AACTTCTGCC ATGTTGCCAC GCGGTCAAGA CGAATTTGCC TTTGCCGGAC TCACTGCCAA AGCGGGCACC ATTGTTAAGG CCGATTTAGT GGCTGAAAGT CCTGTAAACT TCGAATGCAA ATTGTCCCAA TGTATCCAGT TAACCGCCGC TAATGGCGAC AAGATTGATA CTTGGTTAGT GTTAGGTGAA GTGGTGGCCG TGCATATTGC CAAGCATTTA CTCAATGCCG AGGGGATTTA TCAAACTGCA CTCGCCGAGC CCGTTTTACG TGCTGGTGGC CCATCGGCCT ATTATGGGAT CTCCGAAGAT CTGCGTTTCG ATCTACATAG ACCACAAGTG TAG
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Protein sequence | MTNADLRYFY EPQKGHGLPH DPLNAIIAPR PIGWISSRSA AGQRNLAPYS FFNCFNYKPP IIGFASTGWK DSVANIIETG EFVWNLTTRS LAEQMNQTSA MLPRGQDEFA FAGLTAKAGT IVKADLVAES PVNFECKLSQ CIQLTAANGD KIDTWLVLGE VVAVHIAKHL LNAEGIYQTA LAEPVLRAGG PSAYYGISED LRFDLHRPQV
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