| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3342 |
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| Symbol | |
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| ID | 5078117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3892377 |
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| End bp | 3893642 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640500543 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001184853 |
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| Protein GI | 146294429 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTCAA ATATTCACCA CGAAAATATC CTTCAACTGG ATGCTGTAAT GACGCCTGAA
AAGCGTCGGT TTAACCTATC AAAAATTGCG CTCGCATTAT TCGTGCTGAG CACGCTGGCA
TTTCTCGCTC AGCCTGTATT GGCTGGCGGT GATCACGCCC CCGTCGCTAA GGAAAGCGGC
GATTCGGTAA CGCAAATGGC GTCGACGGAT GAACACGGCG AACAGGCGCT GAAATTGACC
GAAGCGCAGC AAGCCTTGGC GGGGATTAGT TTGTTACCTT TGTCGAGCAA TAGCTTGAAC
CTCGCCAATT TGAATCTCGA TATTAGGGCG ACGGCGACCT TAGTGGTGGA TCGCGATCGA
ACCGCGACCC TTGCGCCGCA GCTCGATGTG CGTGTGTTGG CGCGCCATGT GGTGCCGGGA
CAAGAAGTGA AAAAAGGTGA GCCTTTACTT ACCTTGGGTG GCGCAGCCGT TGCGCAGGCA
CAGGCGGACT ACATTAATGC CGCCGCCGAA TGGAGTCGAG TCAAACGCAT GAGTGAAGGT
GCGGTTAGCG TCAGTCGGCG GATGCAGGCG CAGGTGGATG CCGAACTTAA ACGGGCGATT
TTAGAGGCAA TTAAGATGAC GCCCGCGCAA ATTCGTGCAC TGGAATCGAC GCCCGAAGCC
ATAGGCAGTT ATCAACTCTT AGCGCCAATT GACGGCCGAG TGCAGCAGGA TATCGCCATG
CTAGGTCAAG TGTTTAGCGC GGGCACGCCC TTAATGCAAC TGACCGATGA ATCCTATTTA
TGGGTTGAGG CGCAGTTAAC CCCAACTCAA ACTATGCATA TCCAGGTTGG CAGTTCAGCT
TTAGTGCAAG TAGGGGATAA GACGTTGGCA GGTAAGATCA TCGGTCGCTC CCATGAACTC
GACAGCGTAA CGCGCACCGA GCAAGTGCTG GTGAGTATGC CCAATCCTAA TCATGTGTTG
CATGCGGGGC AATTTGCTGA ACTCTATTTT GCTGGCTCTA CTACCGATCC AAACGGCAGT
GGCATAGTGC TGCCCGATGC GGCGTTGACC CGTGGCGGCG ATGGCGATTG GCAGATTTTT
ATTCAAGATG AGGATGGCTT CGAGTCCATT GAGGTAGAAG TGGTGCAGCG TCAACGCGGT
TTGAATCTAG TGCGTGGGCC AGAGCTTGAA AAAGCCAAAC AGGCACAGCT CAATGTCGTG
GTGGCTGGCG CGTTCTTCTT GGCATCCGAG CAGGCGAAAG CGGGCTTTGA TATTCACGCC
CACTAA
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| Protein sequence | MNSNIHHENI LQLDAVMTPE KRRFNLSKIA LALFVLSTLA FLAQPVLAGG DHAPVAKESG
DSVTQMASTD EHGEQALKLT EAQQALAGIS LLPLSSNSLN LANLNLDIRA TATLVVDRDR
TATLAPQLDV RVLARHVVPG QEVKKGEPLL TLGGAAVAQA QADYINAAAE WSRVKRMSEG
AVSVSRRMQA QVDAELKRAI LEAIKMTPAQ IRALESTPEA IGSYQLLAPI DGRVQQDIAM
LGQVFSAGTP LMQLTDESYL WVEAQLTPTQ TMHIQVGSSA LVQVGDKTLA GKIIGRSHEL
DSVTRTEQVL VSMPNPNHVL HAGQFAELYF AGSTTDPNGS GIVLPDAALT RGGDGDWQIF
IQDEDGFESI EVEVVQRQRG LNLVRGPELE KAKQAQLNVV VAGAFFLASE QAKAGFDIHA
H
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