| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3328 |
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| Symbol | |
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| ID | 5078103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3875822 |
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| End bp | 3877543 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640500529 |
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| Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001184839 |
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| Protein GI | 146294415 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTAC TACTAATCGA TGATGATGAA GTGGATAGAA CCGCGGTCAT CAGAGCATTG
AGGCAGTCAA AATTAGCGTT TAATGTCATT GAGGCAAATT GTGCGTTCGA TGGATTAAAC
CTAGCGTTAG AACGCCATTT TGATGGCATT TTATTGGACT ACATGCTGCC CGATGCCAAT
GGCCTCGAAG TGCTGATTAA ACTCAATGCG ATGACTCAAG ACCAAACCGT AGTCGTGATG
CTCAGCCGTT ATGAAGATGA AAAGTTAGCC CAGCGCTGTA TAGAACTGGG TGCTCAGGAT
TTCTTACTCA AAGATGAAGT TAATTCCCGT ATTCTTACCC GAGCTATTCG TTACGCCAAA
CAACGAGCCT CAATGGCATT AGCACTACGT AATAGCCATC AAAAACTGAA AGAGCTAGCG
GAGCATGATT CGCTGACGAA ACTCGTTAAC CGTTATGGGT TCGAGCTTTG TTTAAATCGA
GCCATAGCTA GAGCCAAAAG GAGTAACAAT TATTTAGCGG TAATTCTACT CGATCTAGAT
GATTTTAAAG CGATTAACGA TACATTAGGT CACCAGACTG GCGATATCTT ATTAGTCAAA
GTGGCCTCTC GCTTAAGTGA GGTTCTGCGG GATGGTGATG TCATTGCTCG TTTAGGGGGC
GATGAGTTTG TTGTCCTGGT GACGGATGAT GATTACAAGT ATTTTCCGAT GATAGTGGCT
AATCGACTGC TTAAGGCATT TGAGGAGGTT TTTTGCCTCG GGGATAATGA TGTGCTGATT
GGTGCCAGTA TTGGCGTTGC TTTTTATAAC GAGGCTGCAT CAGACAGTTC CGAGTTGATG
AAATGTGCCG ATATTGCGAT GTACCGCGCC AAGAAAATGG GGCGTAATCA GATCCAATTT
TATTCTGAAG CCTTAGATAG AGAGGTGCGT TATCGCAATC ATATCGAGTC AAGTCTTAGG
GTTGCACTCA GACAGAATGA ATTTAAGGTG TATTACCAAG CACAGGTTGA TTCTTTGACC
CATCAAATGG TCGGTATGGA AGCACTTATT CGTTGGCAGC ATCTTAAAGA CGGGGTTATC
GCACCGGATC AGTTTCTCCC TATTGCAGAA GAGATGGGCC TGATGGAGGA GATTGGGGAT
TGGGTTCTCG CGGAGGCTTG TAGACAAGCT CAGATTTGGC TGACACAACT AAAACCCATT
GGGCGTGATT TCACCATTGC GGTAAATTTA TCAGCCTCAC AAATAGCGCA GATTGATTTG
CTGAGTAAAA TTATCCAAAC ACTGGAATTA ACGGGTTTAC CTCCTACAGC ACTAGAGTTA
GAGATTACTG AGAATTGTTT GATTGAAGAT CCCCATGAAC ACGCTAAAGT TTTAGATCAA
ATCGCTAAAC TTGGTGTTCG TTTCGCCCTC GATGATTTTG GTACAGGATT TTCATCCTTA
GAACACATCA AATTATTCCC TATCAGTGTA TTGAAAATAG ATAAAAGCTT TATCGCATCC
TACGATAAAG ATGAAAAAGA CACTCGATTA TTAGCCGCAT TACTTAATTT TGCCTATGGT
TTTAATGTTA TTTCTGTCGC AGAAGGCGTG GAAACATTGG AACAGGCGGA GTTTTGTACG
GCTCGCAATT GTAATATTTT GCAAGGATAT TTATTCTCTC GGCCCTTAGA GGCAATAGAC
TTTGAGGCAA AATTTATTAC ACCATTACTC ACAAAATTGT GA
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| Protein sequence | MDLLLIDDDE VDRTAVIRAL RQSKLAFNVI EANCAFDGLN LALERHFDGI LLDYMLPDAN
GLEVLIKLNA MTQDQTVVVM LSRYEDEKLA QRCIELGAQD FLLKDEVNSR ILTRAIRYAK
QRASMALALR NSHQKLKELA EHDSLTKLVN RYGFELCLNR AIARAKRSNN YLAVILLDLD
DFKAINDTLG HQTGDILLVK VASRLSEVLR DGDVIARLGG DEFVVLVTDD DYKYFPMIVA
NRLLKAFEEV FCLGDNDVLI GASIGVAFYN EAASDSSELM KCADIAMYRA KKMGRNQIQF
YSEALDREVR YRNHIESSLR VALRQNEFKV YYQAQVDSLT HQMVGMEALI RWQHLKDGVI
APDQFLPIAE EMGLMEEIGD WVLAEACRQA QIWLTQLKPI GRDFTIAVNL SASQIAQIDL
LSKIIQTLEL TGLPPTALEL EITENCLIED PHEHAKVLDQ IAKLGVRFAL DDFGTGFSSL
EHIKLFPISV LKIDKSFIAS YDKDEKDTRL LAALLNFAYG FNVISVAEGV ETLEQAEFCT
ARNCNILQGY LFSRPLEAID FEAKFITPLL TKL
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