Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3315 |
Symbol | |
ID | 5078090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3865006 |
End bp | 3865836 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640500516 |
Product | dehydratase |
Protein accession | YP_001184826 |
Protein GI | 146294402 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000241426 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGTCGC TGCTTTCTCT TTATCGCAAG ATATTTTTTG GCCGCAAACC AGGTTGGGAT CAACAGCCAT TGCCTCACAT TAGAGTGACT GCACCTGATG TTACCGTCTC AGAAGCAAAA GTGAGTCAAT ACGCCCAAGT TTGTGGTTTC CAGTTTGATG GTAACCTGCT ACCTCCAACT TATTTATACG TGATGGCGTT TCGTTTACAC GCGGTGATTT TTACCCATGA TGGTATTACA TTTCCATTAC TTGGCATGAT CCACCTTAAA AACCGTATCC AAGTATATCG TCCAACCACA GTCAACGAAA AATATTCCTT TGAGTGTGCG TTAACGACAA GTCGTGAAAC GGATTCAGGC TTGGAGTTTG AATTTGTTTC TAAAGTGTAT GTTGGTGAGG AGTTAGTGTG GGAATCACTC TCGACCTATT TATATCGTAT TGAAACCGCA GGTCGCCGAG TTCGCCCACC TAAGGCGATT GAAATGGAAT GGGATGCTCC GCAAGCGTGG GAGCTGGGGG AAGATCTGGG CCGTCGGTAT GCAAAGGCAT CCGGTGACTA TAACTTGATC CATTTGCATC CATTGTTATC AAAGCGATTT GGCTTTGATC GCGTACTCGC CCATGGTATG TGGTCTAAAG CCCGCTGTTT GGCTGAGTTA ATGCCTGAAC TTGGTACTCG CCCATTCACT GTCGATGTGA CATTTAAGCT GCCACTCTTA ATGCCTGCAC AGGTCGGGTT TGGTTATGAG AAAAACGAGG ATAATTGGGT GTTTGAGCTT AGAGACAGTA AAGGTCGCCG TCCACATCTG AGCGGTGAAA TATATTTTTA G
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Protein sequence | MPSLLSLYRK IFFGRKPGWD QQPLPHIRVT APDVTVSEAK VSQYAQVCGF QFDGNLLPPT YLYVMAFRLH AVIFTHDGIT FPLLGMIHLK NRIQVYRPTT VNEKYSFECA LTTSRETDSG LEFEFVSKVY VGEELVWESL STYLYRIETA GRRVRPPKAI EMEWDAPQAW ELGEDLGRRY AKASGDYNLI HLHPLLSKRF GFDRVLAHGM WSKARCLAEL MPELGTRPFT VDVTFKLPLL MPAQVGFGYE KNEDNWVFEL RDSKGRRPHL SGEIYF
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