Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3311 |
Symbol | |
ID | 5078086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3860980 |
End bp | 3862164 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640500512 |
Product | hypothetical protein |
Protein accession | YP_001184822 |
Protein GI | 146294398 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00394375 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGTTT TTAACACCCA AGTTTCTTTG GTGGCATTAG CCTGCGCGTT TGCTTCACCT TCGTTGTTTG CCGCTGATTC TAGCTTGACC AACCCTAATA TTAGCGCGGT ATTAAATGGT TATTACCAAA CGGGCGAACG GCCTTTATCT GAAACCTCTG AAGGTTTTGG TCTAGGTGAG ACTGAATTAG CCATGAGTGC CAATATTGAT GATATGTTCT ATGGCAAGGT GACTGCCGTT GTTGAAATCC ATGATGGTGA GAGTGAGCTC AACCTTGAAG AAGCCTTTAT CCAGACGATG GCGATGCCAG GGGGATTTTC TATTCGTGGT GGTCGTTTTT TATCGGATAT TGGCTACCTT AATAACCAAC ACTTACATAC TGATTCTTTC ACCGATCGTC CTATCGCCTA CCGTGCTTTT TTAGGTGGTC ATTACTTTGA TGATGGTGTG CGCTTAAACT TTGTTGCTCC AACCGATCTT TATTGGACTA TGGGTGTAGA AGCCTTTAAA GGAGAAAGTT TACGTGCGGC CGATGAGCAT GGTGAGCGTG AATTTGAAAA TGTTGGGGTT TACACTTTAT ACACCAAAAT CGGTGGTGAC ATTGGCGATA ACAGCTCATG GCAAGCAGGT TTAAGTTACT TGCGTAACGA AAATGGTCAA GTGACCGCCC ATGAGGAAGG TGAAGAAGAT GAACATGAAC ATGAACATGA AGAAGGACAT GATCATAGCC ATGCGGCATC TTATACGGGT AAAAATACCT ATGGGGCTGA TTTTGTTTAT AAGTGGGCAC CTAACGGTAA CTACAAATAC CAAAATTTAA CCTTGAGCGG TGAATATTTC CGTGTGACGG ATTTTACGCC AGTAGATTTG CATCCAGAAG ATGCTCCGAG CAAGGATTAT CATCAAGGTT GGTATTTGAG TAGTGTGTAC CAATTTACAC CAAGTTGGTC TGCTGGAGTG CGTTATGGTG AAGTTGATAC TCAAGAACTC CATGGCGATC ATTTTCATGC ACAAAAGTTG AAGGAATCAG AGGTCACACT GGCATGGCAT TCGAGCCATT TCTCGACGGT TCGTTTTCAG TATACTAATC AAAAAGGGAC GAATTTTGAT GGCATTGAAG ACGATAACAT CTTTACTATT CAGTATATTA TGACGTTGGG GGCTCACGGT GCGCATCAAT TCTAA
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Protein sequence | MTVFNTQVSL VALACAFASP SLFAADSSLT NPNISAVLNG YYQTGERPLS ETSEGFGLGE TELAMSANID DMFYGKVTAV VEIHDGESEL NLEEAFIQTM AMPGGFSIRG GRFLSDIGYL NNQHLHTDSF TDRPIAYRAF LGGHYFDDGV RLNFVAPTDL YWTMGVEAFK GESLRAADEH GEREFENVGV YTLYTKIGGD IGDNSSWQAG LSYLRNENGQ VTAHEEGEED EHEHEHEEGH DHSHAASYTG KNTYGADFVY KWAPNGNYKY QNLTLSGEYF RVTDFTPVDL HPEDAPSKDY HQGWYLSSVY QFTPSWSAGV RYGEVDTQEL HGDHFHAQKL KESEVTLAWH SSHFSTVRFQ YTNQKGTNFD GIEDDNIFTI QYIMTLGAHG AHQF
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