Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3308 |
Symbol | |
ID | 5078381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3858399 |
End bp | 3859184 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640500509 |
Product | 1-acyl-sn-glycerol-3-phosphate acyltransferase |
Protein accession | YP_001184819 |
Protein GI | 146294395 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.251542 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGGCTA TACTGTCGCC AATTTTATCG TTGGAGTATG CTGTGCTGTT AATCGTCAGA TCTATGCTGT TGGCGGTGTC TTTGTTGCTT GCCTTTATTT TTGGTGGATT GGTGTGTTTA CTCAGACCTC GCCACCGTGA CAATGTACAT ATGTTCGCCA AGATCTTCTC TTCTGTTGCA CCGATCCTAG GGATAGAAGT GATCGTTCGT CGGCATAAAG AGGTGCAGGA TGGCCCCTAT ATTTTCTTAG CAAATCATCA GAATAACTTC GATCTTTTTA CTCACACTAA GGCCGTTCCT AAGGGCACGG TTAGCTTAGG TAAGAAAAGT TTGGTTTGGA TGCCACTATT TGGCCAAATT TATTGGTTGT CGGGCAATAT TCTTATCGAT CGGAAAAATC GACACAGTGC CTTTGATACG ATGGCGAAGA CAGTTGAGAA AATTAAGCAA AAAAGTTTAT CTGTATGGAT TTTTCCTGAA GGCACCCGTT CTCGAGGACG TGGTTTATTA CCCTTCAAGG CGGGGGCTTT TCATACAGCG ATTGCAGCAG GTGTCCCAAT TGTGCCCGTG TTAGCTTCCT GTCAGAGCCA TATTAATTTA AATCGTTGGG ATAATGGGGT TGTTATTATC GAAATGATGG CGCCAATACC CACTGCGGAT ATAGACAAAG CGGATGTTAA AGCTTTTTCT GCACAAATTT ATGACAGTAT GTCGGCAAAA TTTAATGAGA TAAACCGAGA AGCGGCAACA TTAATGGGTA AAACTCCTAT GGATGATGGC GTATAA
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Protein sequence | MLAILSPILS LEYAVLLIVR SMLLAVSLLL AFIFGGLVCL LRPRHRDNVH MFAKIFSSVA PILGIEVIVR RHKEVQDGPY IFLANHQNNF DLFTHTKAVP KGTVSLGKKS LVWMPLFGQI YWLSGNILID RKNRHSAFDT MAKTVEKIKQ KSLSVWIFPE GTRSRGRGLL PFKAGAFHTA IAAGVPIVPV LASCQSHINL NRWDNGVVII EMMAPIPTAD IDKADVKAFS AQIYDSMSAK FNEINREAAT LMGKTPMDDG V
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