| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3306 |
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| Symbol | |
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| ID | 5078379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 3856905 |
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| End bp | 3857879 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640500507 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001184817 |
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| Protein GI | 146294393 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.198506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAACG ACCAAAGCGC AATGAACGAA CTACACTGGC TCATTGATAT GGTACAAACC
ATTGAAGTAG GCTTGGTGGT GTTAGATCGG CATTACAATA TCCAACTATG GAATGGCTTT
ATGGAGAATC ACAGCGGTGT TTCTCCAAAT TCAATCAAAG GCCAAAACGT ATTTACGCGT
TTCCCCGATC TACCCGCAAC TTGGTTAAAG CAAAAAATGG AATCGGTTTT TATGCTCAAA
AACCGAGCAT TCATCAGTTG GGAGCAGCGC CCATACGTGT TCCAGTTTAA AAATTACCGT
CCTATTACTG GTCGCGCTGA CTTTATGTAC CAAAACGTGA CACTCCTCCC GCTGGCCTCC
TTAACGGGCA AAATCACCCA CATCAGCGTG ATTGTGTATG ATGTCACTGA TATTGCCGTC
AACAAGTTAC AGTTAAAAGC GGCAAACGAA CAACTCGAAC GCCTAAGCCA AACCGATGGA
CTCACCCAAC TGCATAACCG TCGGCACTGG CAACTATGCC TAGAGCATGA ATTTGACTTA
TATGCTCGCT ATAACGATAT CGCGAGCCTA GTGATGATAG ACATAGATAA CTTTAAATAC
ATTAACGATA CCTATGGTCA TGTCGCTGGG GATAAAGTGA TCCAACATAT AGCCCATATT
CTCAGCCAAT CTTTACGGGA AACCGATTGC GCAGGACGTT ATGGAGGGGA AGAGTTCGCA
GTTGTTATGC CAAAAACCAG CGGTGAAGAT GCCTTACATT TTACTGAACG TCTACGGGAA
AAAATTGCTG AGTCGACCAT AGTGTATGAG AGCCTAAAAA TAAAAGTGAC TGTCAGCTTA
GGGGTGTGCG AGATAGGCAA GCATATTAGT AGTAGCTCAA GTTGGATTTC CTGCTCTGAT
AAAGCACTAT ACGAAGCAAA GCAAAAAGGT CGTAACTGTA GTGTACTACA TACTGAAAAA
ACAATAATCA CATGA
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| Protein sequence | MSNDQSAMNE LHWLIDMVQT IEVGLVVLDR HYNIQLWNGF MENHSGVSPN SIKGQNVFTR
FPDLPATWLK QKMESVFMLK NRAFISWEQR PYVFQFKNYR PITGRADFMY QNVTLLPLAS
LTGKITHISV IVYDVTDIAV NKLQLKAANE QLERLSQTDG LTQLHNRRHW QLCLEHEFDL
YARYNDIASL VMIDIDNFKY INDTYGHVAG DKVIQHIAHI LSQSLRETDC AGRYGGEEFA
VVMPKTSGED ALHFTERLRE KIAESTIVYE SLKIKVTVSL GVCEIGKHIS SSSSWISCSD
KALYEAKQKG RNCSVLHTEK TIIT
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