| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3291 |
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| Symbol | |
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| ID | 5078364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 3832214 |
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| End bp | 3835420 |
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| Gene Length | 3207 bp |
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| Protein Length | 1068 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640500492 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001184802 |
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| Protein GI | 146294378 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.563171 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACGTA TTTTATTGTT CATTATTGTT TTTCTCTCAT TTTCTATCCA AGCCAACTCT
CCCCTACAGT TGGATAAACG TCTTGGACTC AATAATAAAA ATCAGCAGCA AACCGCAGGT
ATTGATGAGC AAATTACAGA GTTAAAGAAC AACATAGATA AGCTGGCAGC CAATGCAGCC
AGTTTTCAAC AAGCACAATT GGACTTTGAA GATAATAAAA AAGAAATTAA CCAAAAGTTA
AAAGAAGCCT CAAAACCCTT AAAACTCAAA AAAAACACCG ATCTTAGCCA GCAAGCATCA
ATCGCTTATT CACACCTTTC AGAGCTCAAA GAAAGCGAGG CAGCATTAGG TAACCAAGTT
AATGAATTGC TGCAACGCCA CAATCTTTTA CCCTCGGTGA TCGCGACTGC CAGACAAAAT
GTGGTGCAGA ATAAAAAAAC GGAGTTGGCC CCCTTAGACA CCCCTTCGGG CGAGTTACAA
CAAACCCAGC GACTCTTCTT TGAGCAAAGC CTTGCAACTA GTGAGGCTGA GCTAGCGAGT
AGTCAAAAGC GCATCGAATT AACTCAACTA AAATTACAGT TAGTACGCCA ACAATTAATC
CAACAAGAGG CGCTCATTGA AACAATCAAT AAGGCAATTA ATAAGCAGCG CCAGCAGCAA
ACTGATGCAA CGCTTGCCAA AAACCTAGTC GATACGGATA GCAAAGAGTT AGATCCTGTT
ACACGCAATA TTGCTGATAC CAATCAAATT TACGGTCAGA AACTACAAAC ATTAACCTTA
CAAATTAATA ATGTAGTTGA GCAACAAGAA CAAGCCGAGA TCCAATATCA GTCTCAAGCT
AAGCAGCTCG CCAATATTCA AGAGCAAATT ACTTGGGTCA AAATGAACTC AGCTTTTGGG
GAGCGTTTTT TGCAAATGCT GCAATCGCTA CCTAAGCCTC CAAACCATGA AAAGCTGCAA
ACCTTGATCG CCGATGCGCG CTTAGACAGA TACCATTTAG AGCAGCAACA AGCCCTGAAT
GACCAAGAGT TAGAACAATC AGGACTCTAT AATGACAGTC AAATTAAGCT GTTAACTTCC
CAACAAGCGC TTATTGCACA GTTAATGCAA AGCTATGACC AATATTTAAG TGAACTTGGC
AAACTTAAAG TTAATTATCA GCAACTTAGC CAGCAAAATC TTACCCTAAA AAATACGCTA
AATGAGCACT TATTTTGGGT TCCCAATGCT GCCAGCATCA ATAAACTATG GTTTACCGAT
GTGCAACGCA GCACGATTTG GTTAGCCCAA ACAGCGCAAT GGGGACAACT CACGAAAGCG
TGGCAAGAGC AAAATGATTA TTGGTCTTGG TGGATTATAT TGCTAATACT TTGTTTAATG
ACCCAAGATC TGGTTACTCC TAAATTCAAT CAGCTACTAA CACATTACAC CACCTATGTT
GGCAATGTGA CGCAAGATAA GTTTATTTAT ACCCTAAAAG CCCTGCTTTG CAGTGTTTGT
TATGCCTTGA TAAAGCCATT ACCCGTTGTG ATTGCGGGAT TGATTTTTTA TCAGTCCGAA
CGCAACTTCG TGCAGGCCAT TGGCATGGGA ATTTTAGTTA TTGGATTAGT TTACCTACTG
TATCGTCTGA TTTTTGTACT GGCTCTTGAT AAAGGCGTGC TTGTCGGTCA CTTCAGACGT
CCTTCAAAAC TAATTCAAGC GGGTCAATTT AGATTAAAGC ACTTTGTATT AGTGGCTAGC
CCACTACTGG GTTTAATGGG TTTTACTGAA GTACTCGATG CATCCTTGGT TCGTAATAGC
ATAGGGCGCG GGGCATTTAT TCTTTTTTGT ATTATTTTAT TCTTGTTATA TAAAGATATT
TTTGTGTTAA ATCGCCAAAA TATCGATTCT AAGATGGACG GTAAAAACAA AAAACTCCTT
CAAAAAATGC TTTGGGCTTT GTTAATTGTT GTACCACTGT TCAGTGCTGG GCTTGCATTT
AGAGGCTATT ATTTCACCGC GTTTCAAATG TTGTTACAAC TACAACTCTC CTTAGTATTA
GGTTTGGGAT TCTTACTCTT ATATCAACTC ATCAAACGCT GGATGCTGAT TGAGCGCCGA
CGCATTGCGT TTGATCGCGC AAAAGCTAAA CGTGCAGAAC GATTAGCTCA AAGAGAAAAA
CACGAAACAC ACCATCTCTC AAGTGATGGC CAAGATACCT ATGAAGAACC CGTTGTCGAC
TTGGAAACGA TTTCGAGCCA ATCATTAGGC CTTGTTCGCT CATTACTTTT ACTGGCCTTT
TTAGCCAGTT TAATTGGCTT GTGGACTCAA ACCCATACGG CATTATTCTC CTTCCTTGAT
GGCATAACAT TGTGGACAAC CAACACGAGT GTCAATGGGG TAGAGCAACA ACTACCTATC
ACAATGAAAT CCCTCATGTT TGGTTTAATT GTGGTTGGCT TTTCATTAAT GGTCGCGACA
AATCTGCCCG GCTTGCTAGA ACTGATGATC CTCCAACGGC TCGAGCTTTC ACCCGGCACC
GGTTTTGCTA TTACCACAGT CAGCCGCTAT TTAGTGGTCT TCTTAGGGTT ATTGATCGGC
TTTTCAAACC TAGGGATGGA ATGGTCCAAA CTGCAATGGT TAATCGCGGC GCTCTCACTT
GGTTTAGGTT TTGGTTTACA AGAGATTTTT GCCAATTTTA TTTCAGGTTT GATTATTTTA
TTTGAAAAAC CCGTACGGAT TGGCGATACC GTCACTATCC GGGAGTTAAC GGGCACCGTC
AGTAAAATCC AAATCCGCGC GACCACGATT ATCGATTGGG ATAGAAAAGA AATTATCATT
CCAAACAAAG CATTTATTAC TGAGCAATTA ATCAATTGGT CATTATCAGA TCCTATTACT
CGGGTTATTG TCTATGTGTC GGTGGCACGG GATTCTGATC CCGCAAAAGT CGAAGCAACC
CTCTATCAAG CAGTGCAGGA GTGTGAAGAT GCACTCCCAA CGCCAGAGCC TGAGGTCTGG
TTCGCAGGCT TTGGTAAACA TACACAAGAC TACGAGGTAC GCGCCTATGC TAAAGAAATG
TCGTCTCGCT GGCCTCTACG CCATGATTTG CATAAACGAA TTACCAGAAA GCTGAAAGAA
AACAATTTAG AACTCGCCTA CCCTCAGATG GAAATCCATA TCAAAAATGG TCAAAATCGG
GATCAGGTCG GTATCATTAG AAGCTAA
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| Protein sequence | MPRILLFIIV FLSFSIQANS PLQLDKRLGL NNKNQQQTAG IDEQITELKN NIDKLAANAA
SFQQAQLDFE DNKKEINQKL KEASKPLKLK KNTDLSQQAS IAYSHLSELK ESEAALGNQV
NELLQRHNLL PSVIATARQN VVQNKKTELA PLDTPSGELQ QTQRLFFEQS LATSEAELAS
SQKRIELTQL KLQLVRQQLI QQEALIETIN KAINKQRQQQ TDATLAKNLV DTDSKELDPV
TRNIADTNQI YGQKLQTLTL QINNVVEQQE QAEIQYQSQA KQLANIQEQI TWVKMNSAFG
ERFLQMLQSL PKPPNHEKLQ TLIADARLDR YHLEQQQALN DQELEQSGLY NDSQIKLLTS
QQALIAQLMQ SYDQYLSELG KLKVNYQQLS QQNLTLKNTL NEHLFWVPNA ASINKLWFTD
VQRSTIWLAQ TAQWGQLTKA WQEQNDYWSW WIILLILCLM TQDLVTPKFN QLLTHYTTYV
GNVTQDKFIY TLKALLCSVC YALIKPLPVV IAGLIFYQSE RNFVQAIGMG ILVIGLVYLL
YRLIFVLALD KGVLVGHFRR PSKLIQAGQF RLKHFVLVAS PLLGLMGFTE VLDASLVRNS
IGRGAFILFC IILFLLYKDI FVLNRQNIDS KMDGKNKKLL QKMLWALLIV VPLFSAGLAF
RGYYFTAFQM LLQLQLSLVL GLGFLLLYQL IKRWMLIERR RIAFDRAKAK RAERLAQREK
HETHHLSSDG QDTYEEPVVD LETISSQSLG LVRSLLLLAF LASLIGLWTQ THTALFSFLD
GITLWTTNTS VNGVEQQLPI TMKSLMFGLI VVGFSLMVAT NLPGLLELMI LQRLELSPGT
GFAITTVSRY LVVFLGLLIG FSNLGMEWSK LQWLIAALSL GLGFGLQEIF ANFISGLIIL
FEKPVRIGDT VTIRELTGTV SKIQIRATTI IDWDRKEIII PNKAFITEQL INWSLSDPIT
RVIVYVSVAR DSDPAKVEAT LYQAVQECED ALPTPEPEVW FAGFGKHTQD YEVRAYAKEM
SSRWPLRHDL HKRITRKLKE NNLELAYPQM EIHIKNGQNR DQVGIIRS
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