Gene Sputcn32_3288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3288 
Symbol 
ID5078361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp3829243 
End bp3830307 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content45% 
IMG OID640500489 
Productribosome-associated GTPase 
Protein accessionYP_001184799 
Protein GI146294375 
COG category[R] General function prediction only 
COG ID[COG1162] Predicted GTPases 
TIGRFAM ID[TIGR00157] ribosome small subunit-dependent GTPase A 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTAAAA AGAAACCCCT AAGCCAAGGT CAATTACGCC GTATGCGCGC TAATCACGAG 
AAACGACTCA ATCGTGACAG CGGCGAAAAA AATACGCCAG AACTACAGGA TAGTTCACTT 
GGTGCCGAAC AGAGCGGCAC TGTGATTTCC CGTTTTGGCC AACATGCCGA CATCGAAACC 
GAAGACGGCC AAATAGTACG ATGTAATATT CGCCGTACGA TTAATAGCTT AGTCACTGGT 
GACAAGGTCG TCGTACGCTT AGCGATTGAG AGCCAAGCAA ATAGTGGCAT TGCTGGTATC 
GTTGAAGCCG TACATCCAAG ACGATCTTCA CTTACGCGTC CCGATTTATA CGATGGCGTA 
AAAATTATCG CTTCGAATAT CGATCAAATC TTGATTGTAT CTTCAGTGTT ACCCAGTTTT 
ACCACCCAAA TTATCGACCG CTATTTAGTC GCCGCCGAAG ATACCAATAT TCCACCTATC 
ATTATTTTAA ATAAAATTGA CCTATTAAAT CCGCAAGAAG CACCGGTAAT CGAAGCTGCA 
CTTAAACGCT ATCAGGACAT TGGTTATCCT GTGTATAAAG TCAGTAGCAA GTTAGGTGAA 
GGTATCGATA CCATCAAAGG TTTACTTAAA GACAAGGTCA GTGTATTTGC CGGACAATCT 
GGTGTAGGGA AATCTTCGAT AATCAACGCG CTACTACCTG ATGCAGACTT ATTAGTGGGT 
GATGTGTCAG ATAACTCAGG CCTAGGGCAA CACACCACCA CCACAGCTAA GTTGCTACAT 
TTAGCCAGCG GTGGCGATTT AATTGACTCA CCCGGTGTAC GCGAATTTGC GCTTTGGCAC 
TTACCTGCTC AACGGGTTGG TTGGTGTTTT ATTGAATTCC GTGAGTTTCT CGGTGGCTGT 
AAGTTCCGTG ATTGTAAACA CGGTGATGAT CCCGGTTGTG CATTAAAAAC TGCAGTTGAT 
GAAGGTAAAA TTAGCGAAGA TCGCTTCAAC AATTACCATC GGATTATCGC CAGCCTTGAT 
GAGCAACGCC ATGCTCGGCA TTTCCGTGCG GCCACCGATG AATAA
 
Protein sequence
MSKKKPLSQG QLRRMRANHE KRLNRDSGEK NTPELQDSSL GAEQSGTVIS RFGQHADIET 
EDGQIVRCNI RRTINSLVTG DKVVVRLAIE SQANSGIAGI VEAVHPRRSS LTRPDLYDGV 
KIIASNIDQI LIVSSVLPSF TTQIIDRYLV AAEDTNIPPI IILNKIDLLN PQEAPVIEAA 
LKRYQDIGYP VYKVSSKLGE GIDTIKGLLK DKVSVFAGQS GVGKSSIINA LLPDADLLVG 
DVSDNSGLGQ HTTTTAKLLH LASGGDLIDS PGVREFALWH LPAQRVGWCF IEFREFLGGC 
KFRDCKHGDD PGCALKTAVD EGKISEDRFN NYHRIIASLD EQRHARHFRA ATDE