Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3285 |
Symbol | |
ID | 5078354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3824541 |
End bp | 3826040 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640500482 |
Product | carbohydrate kinase, YjeF related protein |
Protein accession | YP_001184796 |
Protein GI | 146294372 |
COG category | [G] Carbohydrate transport and metabolism [S] Function unknown |
COG ID | [COG0062] Uncharacterized conserved protein [COG0063] Predicted sugar kinase |
TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related [TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00260957 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACAAG ATTTATCTAG ACTACCCACA GCGCTTTATA CCCAGCAACA AGTTAGGGAA GCTGAATTAC TCGCTGTTTC ACAGGGTGCA GCGACACTTT ATGAGTTGGT TGAGAGGGCG GGATATGCGG CGTTTCAATA TTTAGCAAAA CATATTGCAA CAGAGCATGG TACAGCATCA ACTCCTCTGC TTATGCTTGT TGGCAGTGGT AACAATGGTG CTGATGCCTT AGTCTGTGCA CGCCTCGCAC TCGAAGCGGG TAATACTGTT TCTGTGATGC TGACTAAAAC GACAGGTAGT GTGGAGTATG AGCGGGCACT CACAGCCTAC GTTAACCAAG GTGGTTTAAC TCAAGAAATC GATATTAATC TGATTTCACA AGCTGAAATC ATCGTGGATG GTTTATTAGG TACGGGTGTG AAAGGTGAAG TGCGTGATGA CACCGCTAAA TTAATCAATG CTATTAATCA AAGTACAGCT TGGGTGCTTA GCCTCGATTT GCCTTCAGGA ATTAATCCGG ATACGGGTGC TGTGGCTAAT GTTGCTGTAA TGGCAGATGT TACCCTCTGT TTTGGGGGGA TCAAGCAAGG TTTACTTACC AGTAAAGCTC GGCATCATAG TGGACTTATC GAGTTTGCCG AATTAGGTTT AACCCCATTT TTTACCCAAT CCAGCGCGCA ACGTGTTGGG CGTGAAATCC TGAAGGATTA CTTTGCGGCT CGGGCACGAG ATAGTCATAA AGGTCAGTCA GGCAAGGTCA CTGTTATTGG CGGTGACTTT GGTATGGCAG GTGCGATCCG TCTTGCGAGC GAGGCTTGTT TGCGTGCAGG AGCAGGACTT GTAACTGTAA TTAGCCGTCC TGAACATCAA CTCACTGTGA ATGTTTCTCG CCCTGAATTG ATGTTTTGGG GCTGCGATCT GGTTGATATG GAAGTCTATC TTCGCCTCGG TTGGGCGCAG GTCATAGTAC TTGGGCCAGG CTTGGGTAAG CATGACTGGG GTTATAATTT GTTTAAGGCT GCAGGGTTGA GTGATAAACC CTGTGTACTA GATGCCGATG CGTTAAATCT TCTTAGCCAT GAACCTCGTC GTCAAAATAA CTGGGTACTG ACACCGCATC CCGGTGAAGC TGCTCGTTTA CTTGGTTGCT CTGTCGCTGA AATTGAGCAG GATAGATTTG CTGCGGTGCT TGCAATGCAG CAAAAATATG GTGGAGTTGT GTTATTAAAA GGCGCAGGAA CTGTGATTTA TGATGGTAAA ACCATGGTCG TTGCACCTGT GGGTAATCCC GGCCTTGCAA GTGGTGGGTG TGGGGATGTG TTATCTGGTA TTATAGGCGC GCTCATGGCA CAAGGTATGG ATAATATGCA GGCAACAATT GTCGCCGTAG TTGTCCATGG TTGTGCTGCC GATCTTGCGG CTACACAGGG TGAGCGCGGT ATGTTAGCAA GTGATTTAAT GCCTTTTATT CGCCAATTAG TGAATAGTGA TTTACTCTAG
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Protein sequence | MAQDLSRLPT ALYTQQQVRE AELLAVSQGA ATLYELVERA GYAAFQYLAK HIATEHGTAS TPLLMLVGSG NNGADALVCA RLALEAGNTV SVMLTKTTGS VEYERALTAY VNQGGLTQEI DINLISQAEI IVDGLLGTGV KGEVRDDTAK LINAINQSTA WVLSLDLPSG INPDTGAVAN VAVMADVTLC FGGIKQGLLT SKARHHSGLI EFAELGLTPF FTQSSAQRVG REILKDYFAA RARDSHKGQS GKVTVIGGDF GMAGAIRLAS EACLRAGAGL VTVISRPEHQ LTVNVSRPEL MFWGCDLVDM EVYLRLGWAQ VIVLGPGLGK HDWGYNLFKA AGLSDKPCVL DADALNLLSH EPRRQNNWVL TPHPGEAARL LGCSVAEIEQ DRFAAVLAMQ QKYGGVVLLK GAGTVIYDGK TMVVAPVGNP GLASGGCGDV LSGIIGALMA QGMDNMQATI VAVVVHGCAA DLAATQGERG MLASDLMPFI RQLVNSDLL
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