Gene Sputcn32_3285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3285 
Symbol 
ID5078354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp3824541 
End bp3826040 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content47% 
IMG OID640500482 
Productcarbohydrate kinase, YjeF related protein 
Protein accessionYP_001184796 
Protein GI146294372 
COG category[G] Carbohydrate transport and metabolism
[S] Function unknown 
COG ID[COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase 
TIGRFAM ID[TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00260957 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACAAG ATTTATCTAG ACTACCCACA GCGCTTTATA CCCAGCAACA AGTTAGGGAA 
GCTGAATTAC TCGCTGTTTC ACAGGGTGCA GCGACACTTT ATGAGTTGGT TGAGAGGGCG
GGATATGCGG CGTTTCAATA TTTAGCAAAA CATATTGCAA CAGAGCATGG TACAGCATCA
ACTCCTCTGC TTATGCTTGT TGGCAGTGGT AACAATGGTG CTGATGCCTT AGTCTGTGCA
CGCCTCGCAC TCGAAGCGGG TAATACTGTT TCTGTGATGC TGACTAAAAC GACAGGTAGT
GTGGAGTATG AGCGGGCACT CACAGCCTAC GTTAACCAAG GTGGTTTAAC TCAAGAAATC
GATATTAATC TGATTTCACA AGCTGAAATC ATCGTGGATG GTTTATTAGG TACGGGTGTG
AAAGGTGAAG TGCGTGATGA CACCGCTAAA TTAATCAATG CTATTAATCA AAGTACAGCT
TGGGTGCTTA GCCTCGATTT GCCTTCAGGA ATTAATCCGG ATACGGGTGC TGTGGCTAAT
GTTGCTGTAA TGGCAGATGT TACCCTCTGT TTTGGGGGGA TCAAGCAAGG TTTACTTACC
AGTAAAGCTC GGCATCATAG TGGACTTATC GAGTTTGCCG AATTAGGTTT AACCCCATTT
TTTACCCAAT CCAGCGCGCA ACGTGTTGGG CGTGAAATCC TGAAGGATTA CTTTGCGGCT
CGGGCACGAG ATAGTCATAA AGGTCAGTCA GGCAAGGTCA CTGTTATTGG CGGTGACTTT
GGTATGGCAG GTGCGATCCG TCTTGCGAGC GAGGCTTGTT TGCGTGCAGG AGCAGGACTT
GTAACTGTAA TTAGCCGTCC TGAACATCAA CTCACTGTGA ATGTTTCTCG CCCTGAATTG
ATGTTTTGGG GCTGCGATCT GGTTGATATG GAAGTCTATC TTCGCCTCGG TTGGGCGCAG
GTCATAGTAC TTGGGCCAGG CTTGGGTAAG CATGACTGGG GTTATAATTT GTTTAAGGCT
GCAGGGTTGA GTGATAAACC CTGTGTACTA GATGCCGATG CGTTAAATCT TCTTAGCCAT
GAACCTCGTC GTCAAAATAA CTGGGTACTG ACACCGCATC CCGGTGAAGC TGCTCGTTTA
CTTGGTTGCT CTGTCGCTGA AATTGAGCAG GATAGATTTG CTGCGGTGCT TGCAATGCAG
CAAAAATATG GTGGAGTTGT GTTATTAAAA GGCGCAGGAA CTGTGATTTA TGATGGTAAA
ACCATGGTCG TTGCACCTGT GGGTAATCCC GGCCTTGCAA GTGGTGGGTG TGGGGATGTG
TTATCTGGTA TTATAGGCGC GCTCATGGCA CAAGGTATGG ATAATATGCA GGCAACAATT
GTCGCCGTAG TTGTCCATGG TTGTGCTGCC GATCTTGCGG CTACACAGGG TGAGCGCGGT
ATGTTAGCAA GTGATTTAAT GCCTTTTATT CGCCAATTAG TGAATAGTGA TTTACTCTAG
 
Protein sequence
MAQDLSRLPT ALYTQQQVRE AELLAVSQGA ATLYELVERA GYAAFQYLAK HIATEHGTAS 
TPLLMLVGSG NNGADALVCA RLALEAGNTV SVMLTKTTGS VEYERALTAY VNQGGLTQEI
DINLISQAEI IVDGLLGTGV KGEVRDDTAK LINAINQSTA WVLSLDLPSG INPDTGAVAN
VAVMADVTLC FGGIKQGLLT SKARHHSGLI EFAELGLTPF FTQSSAQRVG REILKDYFAA
RARDSHKGQS GKVTVIGGDF GMAGAIRLAS EACLRAGAGL VTVISRPEHQ LTVNVSRPEL
MFWGCDLVDM EVYLRLGWAQ VIVLGPGLGK HDWGYNLFKA AGLSDKPCVL DADALNLLSH
EPRRQNNWVL TPHPGEAARL LGCSVAEIEQ DRFAAVLAMQ QKYGGVVLLK GAGTVIYDGK
TMVVAPVGNP GLASGGCGDV LSGIIGALMA QGMDNMQATI VAVVVHGCAA DLAATQGERG
MLASDLMPFI RQLVNSDLL