Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3283 |
Symbol | |
ID | 5078352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3822555 |
End bp | 3823985 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640500480 |
Product | N-acetylmuramoyl-L-alanine amidase |
Protein accession | YP_001184794 |
Protein GI | 146294370 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000101703 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAAAA TTAATCATTA TTTTCATCTT ATTACTCTTT TTTTATGCAC TTTTTTTACT GTATCTGCCC ATGGGGCAAA TCGATTAGAA GGTGTGCGTA TTTGGGCTGC CCCTGAATCG ACCCGTGTAG TGTTTGATCT CAGTGAAGCG CCGAACTATA CCTATTTTTC AATAGAAGGG CCTAACCGTT TAGTGGTCGA TCTTAAAAAG ACTTCAACTA AACTCACCCT TAAAAATATC GACAATAACA GCAAGCTCGT TAAAGGGGTG CGCATTAGTC AATCTCCAAC GAAGGGTGAT TTGCGTTTGG TGATTGACCT TGTAAAGCCT CTTAATGCTA ATTTGTTTTC ACTTCCCGTT ACGGCTCCCT ATGGTAATCG TCTTGTTGTT GACCTTGAAG ATAAAACGGT CACACTGGCA CCACCTGTCG CCAGCTCAAC CCCAGTTAAA AAGTCCGTTA CTCAAAGTAT GCAATCCTCC CGCGATATTG TAATTGCTAT CGATGCTGGA CATGGTGGTG ACGACCCCGG CTCAATTGGT CCATCGGGCC TTTATGAGAA AAAAGTGGTA TTCGAAATTT CTCGGCGCCT TGCGAGTAAA ATTAACGACA CCCCTGGAAT GCGTGCCGTT ATGATCCGCA GTGGCGACTA CTTTGTTAAT TTAAATAAGC GCTCTGAACT TGCCCGCAAC AGTAAAGCTG ATTTGCTGAT TTCTATCCAT GCGGATGCGT TTACTTCGCC CAATCCTCGC GGTGCGTCTG TGTGGGTATT GTCTATGCGT CGTGCAAACA GTGAAATTGG TCGCTGGTTG GAGCAAAAAG AAAAGCATTC TGAGCTACTT GGCGGTGCGG GGGAAATTAT CCAAAATACC GATAATGAAC AATATCTTGC TATGACATTA CTCGATATGT CGATGAACAG TTCTATGGCT ATTGGTCATG CGGTTGCGGG GGATATTCTC AAGGATTTAG GCGCTGTGAC GACGTTGCAT AAAAGTCGGC CCGAATCAGC CAGTTTTGCA GTGCTAAAGT CACCGGATAT CCCCTCAATT TTGGTTGAGA CTGGCTTTAT TTCTAATCCT AAGGAAGAGC GACTCTTATC CAGTCACCAA CACCAAGAAA GTATTGCAAC AGCTATTTAT AAAGGGGTTA GCCGATATTT CCATAGCAAT CCGCCGGCAG ATACTCTGAT AGCCAAACAA AATGGGGCAA GGCCGAGTCC TATATCTAGT TCTAAATCAG CATCTACAGG AATAAGTTCA AGGCCAAGTG TTAGATCTTC TGGTACGGTC AAACATAAAG TCAGCCGCGG TGAATCGCTT TCAGCCATTG CGCAGCGTTA TCAAGTCCCA ATGTCGAGTA TTAAACGTGC GAATGGGATG AAAACCGATG TAGTGCAACT AGGGCAAACG CTCGTTATTC CTGAGAGTTA G
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Protein sequence | MTKINHYFHL ITLFLCTFFT VSAHGANRLE GVRIWAAPES TRVVFDLSEA PNYTYFSIEG PNRLVVDLKK TSTKLTLKNI DNNSKLVKGV RISQSPTKGD LRLVIDLVKP LNANLFSLPV TAPYGNRLVV DLEDKTVTLA PPVASSTPVK KSVTQSMQSS RDIVIAIDAG HGGDDPGSIG PSGLYEKKVV FEISRRLASK INDTPGMRAV MIRSGDYFVN LNKRSELARN SKADLLISIH ADAFTSPNPR GASVWVLSMR RANSEIGRWL EQKEKHSELL GGAGEIIQNT DNEQYLAMTL LDMSMNSSMA IGHAVAGDIL KDLGAVTTLH KSRPESASFA VLKSPDIPSI LVETGFISNP KEERLLSSHQ HQESIATAIY KGVSRYFHSN PPADTLIAKQ NGARPSPISS SKSASTGISS RPSVRSSGTV KHKVSRGESL SAIAQRYQVP MSSIKRANGM KTDVVQLGQT LVIPES
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