| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3281 |
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| Symbol | miaA |
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| ID | 5078350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3819698 |
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| End bp | 3820612 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640500478 |
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| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
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| Protein accession | YP_001184792 |
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| Protein GI | 146294368 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
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| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.03826 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGCTGCCTA AAGTATTATT TCTTATGGGG CCTACTGCCT CTGGAAAAAC GGCTTTAGCA
CTAGAATTAG CCGAAAACCA TAACTGCGAG ATTATCTCAG TTGATTCTGC ACTCATTTAT
CGCGGTATGG ATATTGGTAG TGCAAAACCT TCTATGGAGG AGTTAGCGCG CGGGCCACAT
AGATTGATTG ATATTCGCGA TCCTAGCGAG AGCTATTCTG CCGCCGATTT TAGAGCAGAT
GCTTTAGCTG AAATTGCGCA AATTATTCGC ATGGGGAAAA CACCATTACT CGTTGGTGGA
ACCATGATGT ATTTTAAGGC GCTATTAGAA GGGTTATCAC CGCTTCCGAG TGCCGATGAC
GCCATTCGTG CCGACATTCA GGCGGAGGCT GATGTGAAAG GATGGGAAAC CTTGCATGAC
CAATTACGGG ATATTGATCC CGTGTCGGCG GAAAGAATTC ATCCTAATGA TCCACAAAGG
CTTTCAAGAG CGCTGGAAGT CTATAGAATA AGCGGTAAGA GTTTAACTGA GCTTACACAG
ACTAAGTCTG CACCTTTACC TTACGATGTG GTGCAATTTG CCATTGCACC GCGAGAGCGT
AAAGTCTTAC ATGACTTAAT TGCGCAGCGT TTTCGCATAA TGTTACAGCA AGGTTTTATT
GACGAAGTGA CTCAACTTAA GGCAAGGGGA GACTTACATT TAGATTTGCC ATCAATGCGT
TGTGTTGGAT ATCGGCAATG TTGGCAACAT CTCGATGGAG AATTCGACTA TGATACTATG
GTCGAAAAAG CAGTTGCAGC TACTAGGCAA TTAGCGAAGC GTCAATTAAC ATGGTTACGT
AGTTGGCCAG AGTTAAATTG GCTTGAAAGT GGTGCTGAGG GGAATTTAGT TACACTTATG
CGTCATTGCC GCTAG
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| Protein sequence | MLPKVLFLMG PTASGKTALA LELAENHNCE IISVDSALIY RGMDIGSAKP SMEELARGPH
RLIDIRDPSE SYSAADFRAD ALAEIAQIIR MGKTPLLVGG TMMYFKALLE GLSPLPSADD
AIRADIQAEA DVKGWETLHD QLRDIDPVSA ERIHPNDPQR LSRALEVYRI SGKSLTELTQ
TKSAPLPYDV VQFAIAPRER KVLHDLIAQR FRIMLQQGFI DEVTQLKARG DLHLDLPSMR
CVGYRQCWQH LDGEFDYDTM VEKAVAATRQ LAKRQLTWLR SWPELNWLES GAEGNLVTLM
RHCR
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