Gene Sputcn32_3276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3276 
Symbol 
ID5078345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp3814974 
End bp3815564 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content48% 
IMG OID640500473 
Productubiquinol-cytochrome c reductase, iron-sulfur subunit 
Protein accessionYP_001184787 
Protein GI146294363 
COG category[C] Energy production and conversion 
COG ID[COG0723] Rieske Fe-S protein 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01416] ubiquinol-cytochrome c reductase, iron-sulfur subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000262245 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAATG CGCCAGTCGA TACCGGACGT CGCAGATTCC TGACAGCCGC AACCGCCGTA 
GTAGGTGGTG CTGGTGCCGT CGCTGTAGCG GTTCCTTTCA TCAAGTCATG GAATCCGAGT
GCCAAAGCGA AAGCTGCAGG TGCACCGGTC GAAGTAAATA TCAGTAAAGT AGAGCCAGGT
CAGCTGATCC GTGTTGAATG GCGTGGAAAA CCTGTATGGG TTGTCCGTCG TACAGACGAT
GTGATCAACG CCCTACCAAA ACACGATAAT AAGTTAAGAG ACCCTGCTTC TGTAGAAATG
CAGCAGCCTG ATTATGCAAC GAATCCTCTG CGTTCAATTA AGCCAGAGTT CTTTATTGCT
GTCGGTATTT GTACACACTT AGGATGTTCA CCTACTTACT TACCTGATTC ATTTGGTGAG
CAAGTTGAAG GTGTGACTTC TGGTTTCTTC TGTCCATGTC ATGGCTCTAA GTTCGATATG
GCTGGTCGCG TTTTCCAAGG CGTACCAGCT CCATTGAACC TAGTTGTCCC TCCACATCAA
TACGTTGATG ATGGCACCGT GATTATCGGT GTAGATAAAG GAGTGGCGTA A
 
Protein sequence
MSNAPVDTGR RRFLTAATAV VGGAGAVAVA VPFIKSWNPS AKAKAAGAPV EVNISKVEPG 
QLIRVEWRGK PVWVVRRTDD VINALPKHDN KLRDPASVEM QQPDYATNPL RSIKPEFFIA
VGICTHLGCS PTYLPDSFGE QVEGVTSGFF CPCHGSKFDM AGRVFQGVPA PLNLVVPPHQ
YVDDGTVIIG VDKGVA