Gene Sputcn32_3272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3272 
Symbol 
ID5078341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp3811899 
End bp3812336 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content44% 
IMG OID640500469 
ProductClpXP protease specificity-enhancing factor 
Protein accessionYP_001184783 
Protein GI146294359 
COG category[R] General function prediction only 
COG ID[COG2969] Stringent starvation protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCTT TGACTCCAAA TCGTCCTTAT TTACTTAGGG CTTACTACGA TTGGTTGATG 
GATAACCAAT TAACGCCTCA CGTTGTGGTT GATGCCTTTG TTAAAGGCAC CCAAGTACCA
CAGCAGTATG TGAAGGATGG CCAGATAGTG TTAAACATTG CTGCTGGCGC TGTGGGCAAT
TTGCAAATTA GCAATGAGTT TGTGGAGTTC AATGCGCGTT TTGGTGGCGT ACCTCAACAG
GTATTGCTGC CAATGGCGTC GATTATTGCT ATTTATGCCC GAGAAAATGG TGCTGGTACT
GTTTTCGATG TTGAAGATGC ATATCTGATG GGGGATGAAG CCGAATCAGT TTTATCTGTT
GTTGATGTAA CGGATAAACC AAAGGATCCG ACAGATCAGC CTCCTAAGCG TCGCAGTCAC
TTAACTGTTG TAAAGTAG
 
Protein sequence
MKSLTPNRPY LLRAYYDWLM DNQLTPHVVV DAFVKGTQVP QQYVKDGQIV LNIAAGAVGN 
LQISNEFVEF NARFGGVPQQ VLLPMASIIA IYARENGAGT VFDVEDAYLM GDEAESVLSV
VDVTDKPKDP TDQPPKRRSH LTVVK