Gene Sputcn32_3269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3269 
Symbol 
ID5078338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp3807885 
End bp3809363 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content43% 
IMG OID640500466 
Productdiguanylate cyclase 
Protein accessionYP_001184780 
Protein GI146294356 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGCTG ATTTTACGGT TTTCAGTTGG GTATTGTTCG TTATCTCCGC GCTATGCCTC 
ATCCTTGCTG GGGCGACACT TAAAATCCGT TATCAAGCGG TCACGATTTG GTTTATTGGG
CTGCTGCTGG CTTACGCAAT TCAAGCCTTT GGTTATGCTT TTGAACTGAC AAGCCATGAG
CTAGATTCAA TTAAATTTTG GCTCAATATT GAATTTGTAG GTGCCTGCTT TATTCCTACC
TGCGTAGTCT TGTTTGCGGT GAGTTATCAG ACCCGAACCT CGCCACCTTT ATGGCTAGTG
AGCAGTTTGC TTTCGATCAG TGCCATAGTG CTATTAGGCC AATTAACCAA TGATTTGCAC
GGCCTAGGCT TTAATATTAT CGGGCTAGAA AAAGTGGATA ACATCACTGT CACGACCAAT
CATTTAGGAT GGCTGTACTT AGCTTATTCG CTCTATATTC ATTTGGCCGT TATCGTGAGT
GTGATTATTT TTATTCGCTG CATGCAAAAT ACACATCCGG TGTTAAGGCC ACAGATTTTA
CTCATTCTGG TCGGCATTAC CCTAACTTGG CTGAACTATA TTTGGACGCT TTTTGGCAAT
ACCCCCTACG GCCTTGATAT AGGTACTTTT GGTTTTATCT TTTGTACTAT CGCCTTTGCG
ATAAGTGTGT TTCGTTATGA CTTAATTAAA CTCACCCCGA TTGCACGGGA TCAAATATTT
CACCAAGTTG AACAAGGCTA TATCGTGATT GATGAGCAAT CGCGCTTAAT TGACTATAAC
CCAAAGGCAA AAGCCTTCTT GCCAGCACTA TCGACGGGGA AAATAGGTCA GCCATTAAGT
GGTTTTATTG ACCCATCGCT GGTGGCTGAT AACCAAACTA AGGTGATCAG ATTAGACGAT
GGTAAAAGAG TCCAAGTACA GCGTTCACTC ATGGGAAAAA ACGCCGCCAT GGCGATTGGC
AGTGTGATTA TGCTGTCCGA TGTAACCGAA AAAGAGCAAC TGCTCGAAGA AATGGAAAGA
ATCGCCAATA CCGACTCATT AACGGGCTGC TATAATCGCC ATGCATTACA TTGCCGACTT
AAACAACAGA TTATTGAAAG TCGCCACCAG TTAACGCCCC TTTCTATTGT TGCCTTGGAT
ATTGTCGGCT TTCGTAAAGT GAATGAAGTT CACGGCTATA CCGTTGGCGA TATGCGCCTA
AAACAGTTAA GCCATATCCT CAGTCATCAC TTACCCAGTG ATGCCATATT AATTCGTTAT
ATTGGCGATA TTTTTATTAT TATTTTACCC AGCTATCGGT TAGAGGATGC CAATCAACTC
GCACTGCAAC TAGCAGATAA AGCCAAACAA CTTGCCTCAC TTGCTATCAG CACTTTTTGT
GTTCAACACC ACTCTGAAGA AAGCGATCGA CAAGTCATTG ATCGCCTCTT AGGTGAGGCT
ATGCAATTAA AAAAAATTAG GCCAAGCTTG GCGGTTTAG
 
Protein sequence
MFADFTVFSW VLFVISALCL ILAGATLKIR YQAVTIWFIG LLLAYAIQAF GYAFELTSHE 
LDSIKFWLNI EFVGACFIPT CVVLFAVSYQ TRTSPPLWLV SSLLSISAIV LLGQLTNDLH
GLGFNIIGLE KVDNITVTTN HLGWLYLAYS LYIHLAVIVS VIIFIRCMQN THPVLRPQIL
LILVGITLTW LNYIWTLFGN TPYGLDIGTF GFIFCTIAFA ISVFRYDLIK LTPIARDQIF
HQVEQGYIVI DEQSRLIDYN PKAKAFLPAL STGKIGQPLS GFIDPSLVAD NQTKVIRLDD
GKRVQVQRSL MGKNAAMAIG SVIMLSDVTE KEQLLEEMER IANTDSLTGC YNRHALHCRL
KQQIIESRHQ LTPLSIVALD IVGFRKVNEV HGYTVGDMRL KQLSHILSHH LPSDAILIRY
IGDIFIIILP SYRLEDANQL ALQLADKAKQ LASLAISTFC VQHHSEESDR QVIDRLLGEA
MQLKKIRPSL AV