Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3269 |
Symbol | |
ID | 5078338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 3807885 |
End bp | 3809363 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640500466 |
Product | diguanylate cyclase |
Protein accession | YP_001184780 |
Protein GI | 146294356 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGCTG ATTTTACGGT TTTCAGTTGG GTATTGTTCG TTATCTCCGC GCTATGCCTC ATCCTTGCTG GGGCGACACT TAAAATCCGT TATCAAGCGG TCACGATTTG GTTTATTGGG CTGCTGCTGG CTTACGCAAT TCAAGCCTTT GGTTATGCTT TTGAACTGAC AAGCCATGAG CTAGATTCAA TTAAATTTTG GCTCAATATT GAATTTGTAG GTGCCTGCTT TATTCCTACC TGCGTAGTCT TGTTTGCGGT GAGTTATCAG ACCCGAACCT CGCCACCTTT ATGGCTAGTG AGCAGTTTGC TTTCGATCAG TGCCATAGTG CTATTAGGCC AATTAACCAA TGATTTGCAC GGCCTAGGCT TTAATATTAT CGGGCTAGAA AAAGTGGATA ACATCACTGT CACGACCAAT CATTTAGGAT GGCTGTACTT AGCTTATTCG CTCTATATTC ATTTGGCCGT TATCGTGAGT GTGATTATTT TTATTCGCTG CATGCAAAAT ACACATCCGG TGTTAAGGCC ACAGATTTTA CTCATTCTGG TCGGCATTAC CCTAACTTGG CTGAACTATA TTTGGACGCT TTTTGGCAAT ACCCCCTACG GCCTTGATAT AGGTACTTTT GGTTTTATCT TTTGTACTAT CGCCTTTGCG ATAAGTGTGT TTCGTTATGA CTTAATTAAA CTCACCCCGA TTGCACGGGA TCAAATATTT CACCAAGTTG AACAAGGCTA TATCGTGATT GATGAGCAAT CGCGCTTAAT TGACTATAAC CCAAAGGCAA AAGCCTTCTT GCCAGCACTA TCGACGGGGA AAATAGGTCA GCCATTAAGT GGTTTTATTG ACCCATCGCT GGTGGCTGAT AACCAAACTA AGGTGATCAG ATTAGACGAT GGTAAAAGAG TCCAAGTACA GCGTTCACTC ATGGGAAAAA ACGCCGCCAT GGCGATTGGC AGTGTGATTA TGCTGTCCGA TGTAACCGAA AAAGAGCAAC TGCTCGAAGA AATGGAAAGA ATCGCCAATA CCGACTCATT AACGGGCTGC TATAATCGCC ATGCATTACA TTGCCGACTT AAACAACAGA TTATTGAAAG TCGCCACCAG TTAACGCCCC TTTCTATTGT TGCCTTGGAT ATTGTCGGCT TTCGTAAAGT GAATGAAGTT CACGGCTATA CCGTTGGCGA TATGCGCCTA AAACAGTTAA GCCATATCCT CAGTCATCAC TTACCCAGTG ATGCCATATT AATTCGTTAT ATTGGCGATA TTTTTATTAT TATTTTACCC AGCTATCGGT TAGAGGATGC CAATCAACTC GCACTGCAAC TAGCAGATAA AGCCAAACAA CTTGCCTCAC TTGCTATCAG CACTTTTTGT GTTCAACACC ACTCTGAAGA AAGCGATCGA CAAGTCATTG ATCGCCTCTT AGGTGAGGCT ATGCAATTAA AAAAAATTAG GCCAAGCTTG GCGGTTTAG
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Protein sequence | MFADFTVFSW VLFVISALCL ILAGATLKIR YQAVTIWFIG LLLAYAIQAF GYAFELTSHE LDSIKFWLNI EFVGACFIPT CVVLFAVSYQ TRTSPPLWLV SSLLSISAIV LLGQLTNDLH GLGFNIIGLE KVDNITVTTN HLGWLYLAYS LYIHLAVIVS VIIFIRCMQN THPVLRPQIL LILVGITLTW LNYIWTLFGN TPYGLDIGTF GFIFCTIAFA ISVFRYDLIK LTPIARDQIF HQVEQGYIVI DEQSRLIDYN PKAKAFLPAL STGKIGQPLS GFIDPSLVAD NQTKVIRLDD GKRVQVQRSL MGKNAAMAIG SVIMLSDVTE KEQLLEEMER IANTDSLTGC YNRHALHCRL KQQIIESRHQ LTPLSIVALD IVGFRKVNEV HGYTVGDMRL KQLSHILSHH LPSDAILIRY IGDIFIIILP SYRLEDANQL ALQLADKAKQ LASLAISTFC VQHHSEESDR QVIDRLLGEA MQLKKIRPSL AV
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