Gene Sputcn32_3257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3257 
Symbol 
ID5080098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp3788677 
End bp3790092 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content44% 
IMG OID640500454 
Productlytic transglycosylase, catalytic 
Protein accessionYP_001184768 
Protein GI146294344 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1388] FOG: LysM repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGAAAA ATTTTCGCCA AATGCACGCT TTTGCAGTGC TTATGCTAGC CATGCTAACG 
GCTCATCTCA GTGGCTGCGT AGCCACCTCG GCGGATAATG CGCCAACAGA ATTCACTGCC
ACTACGCCTG AAGAAATAGG TAAAAGTGAC CATTCAGCAC AAGAGACCAG CGATACACCT
GAACCCGTTG AAGAACAATA CAGCGACGTA TGGGAAAAAA TTCAACATGC GCGCACTATT
GACGTACACG ATGAAGCAGA AGTACGTAAA CAACGTAAAT TTTTTGCTGA TAAACAAAGG
TTTATGAATC AAGTTGGTGA CCGTGCAGAG CCTTTTTTGT ATTACATCGT CAGTCAACTA
GAAGCCCGTA ATATGCCGCT TGAATTAGCC TTATTACCTA TTGTTGAAAG CGGTTATAAC
CCACTAGCGC AAGCCAATGG TCCGGCGGGT TTATGGCAGA TGATTCCTGC AACTGGTCGC
AATTTTGGCC TGACCATTAA TTCCGCTTAT GATGGTCGTA AAGATGCGCT GGCCTCAACT
GATGCCGTTC TCGACTACTT ACAGCACTTA TACGATACCC TAGGCAATGA CTGGATCAAC
GCTGTAGCGG GCTATAACAG TGGTGAATTG GTTATAAAAT CCGCAATAGA AAGAAACAAA
GCAAAGGGAA AGCCAACCGA TTTTTGGTCA CTTAATATCC CTGCAAGACA AGTACAAACA
GTCCCTAAGT GGCTCGCTTT TATTCAAATT ATTCGCGAGC CTAGCCATTA CAACTTAAAA
GTGCCTCCAG TTGCCAATCG CCCTTTCCTT GAGCGACTCC CCGCACCTAA TGGCGTTGAA
ATTGGCCACA TTGCCAATGC GGCGGGACTC ACTAAAGCAG AGTTTAAAAC CTATAACCCT
GGTTACCGTC AAAATGTGAT CCCCAGTAAA GGCAAATATC AAATAGCCCT TCCCATTGAA
AACATTGGTG CCTATCAGGA AAATCAAGAT AAACTCTATG CCCAAAAAAG ATATGACAGC
CAAAGTTACA TCGTCAAATC GGGTGATAGT CTAGGTGCTA TAGCGGCTAA GTTTGATATC
TCAGTGAATG AGTTAAAACA GGCGAATAAC CTCACATCAG ATAGGATCAA AGTAGGCCAA
GAACTCACGC TATTAACCCC TTTGGCGGCT AATGATAAAG AGACTAAAGT TGCCCCAGCA
ACGCCTAAAA CAAGCAGTAA ATCTAGCGCC AAGGTCACTG AAACAAAAGC TAAAACGACG
GAAACAAAAG CGGCTACTTA TAAGGTAAAA TCCGGTGACT CACTGGATAA AATCGCCCGT
AAACATAAAG TCAAACTGGC TGATTTAATG AAGTGGAACC AGCTAAATGC TAAGAGCATT
ATTAAACCCG GCCAAGAGCT AAAGCTATCC GAGTAA
 
Protein sequence
MRKNFRQMHA FAVLMLAMLT AHLSGCVATS ADNAPTEFTA TTPEEIGKSD HSAQETSDTP 
EPVEEQYSDV WEKIQHARTI DVHDEAEVRK QRKFFADKQR FMNQVGDRAE PFLYYIVSQL
EARNMPLELA LLPIVESGYN PLAQANGPAG LWQMIPATGR NFGLTINSAY DGRKDALAST
DAVLDYLQHL YDTLGNDWIN AVAGYNSGEL VIKSAIERNK AKGKPTDFWS LNIPARQVQT
VPKWLAFIQI IREPSHYNLK VPPVANRPFL ERLPAPNGVE IGHIANAAGL TKAEFKTYNP
GYRQNVIPSK GKYQIALPIE NIGAYQENQD KLYAQKRYDS QSYIVKSGDS LGAIAAKFDI
SVNELKQANN LTSDRIKVGQ ELTLLTPLAA NDKETKVAPA TPKTSSKSSA KVTETKAKTT
ETKAATYKVK SGDSLDKIAR KHKVKLADLM KWNQLNAKSI IKPGQELKLS E