| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3254 |
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| Symbol | |
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| ID | 5080095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3782592 |
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| End bp | 3785690 |
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| Gene Length | 3099 bp |
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| Protein Length | 1032 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640500451 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001184765 |
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| Protein GI | 146294341 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGTTGC CTGAGGTTTG TATTCGTCAC CCAATATTTG CTTCTGTACT CAGTATTATG
GCTGTTCTAC TGGGGTTAAT TGCCTTTCAC AAACTCGATA TTCAATATTT CCCTGAGCAC
ACGACTCACT CGGCATCGGT AAATGCATCG ATTGCAGGGG CTAGCGCCGA TTTTATGTCG
AGCAATGTCG CCGATAAGTT GGTTGCTGCC GCATCTGGAT TAGATAAAGT CGATACCATG
TCGACCGACT GTAGTGAGGG CCGCTGCTCG TTAACGATTA AATTTAAAGA TGACACTACC
GATATTGAAT ACACCAACTT AATGAATAAG TTGCGTAGTA GCGTTGAAGG GATTAACGAT
TTCCCCCAGA GCATGATAGA TAAGCCCACA GTGACAGACG ATACTTCGGC TACCGATTCT
GCCAGTAATA TCATCACCTT TGTGAATACT GGAGGTATGG AAAAACAGGC GATGTACGAC
TACATCAGCC AGCAATTAGT GCCGCAGCTC AAACAAGTTC AAGGCGTTGG CGCTGTGTGG
GGGCCCTATG GAGGATCACA AAAAGCAGTG AGAGTCTGGC TTAATCCTGA GCAAATGAAG
GCACTCAACA TTAAGGCCGC CGATGTGGTG GGCACGTTAG GCTCCTACAA TGCCAGTTTT
ACCTCGGGTG CCATTAAAGG GAAGTCGCGG GATTTCTCGA TTAACCCTTT GAATCAAGTT
GAGACGCTAG AAGATGTGAA GGATCTGGTG ATCAAGGTCA GCGACGGCAA GATCATCCGC
GTATCCGATG TTGCTGAGGT GGTGATGGGC GAGGAGAGTT TATCGCCGAG TCTGTTGTCG
ATTGGTGGAC ATAGTGCAAT GTCATTGCAG ATTTTGCCGC TGAGCAACGC TAATCCCGTG
ACTGTGGCTT CGAACATTAA AGCCGAAATT GCACGTATGC AGAAACATTT ACCCCAAGGC
TTAGAAATGA ACTTGGCCTA CAATCAAGCG GATTTTATTG AAGCCGCTAT CGATGAAGGC
TTTGCTGCGT TGATTGAAGC GGTGATCTTG GTCTCGCTGA TTGTGGTGCT ATTTTTAGGG
AGCTTACGGG CGGCATCGAT CCCGATTATT ACCATTCCCG TGTGCGTAAT TGGGGTGTTT
GCGGTGATGT CGGCCCTCGG TTTTAGTATC AATGTATTGA CGATTCTGGC AATTATTTTG
GCTATTGGCC TTGTTGTGGA CGATGCCATT GTGGTCGTCG AAAACTGTTA TCGCCATATC
GAAAATGGTG AAACCCCCTT TAATGCCGCA ATTAATGGGT GTCAGGAGAT CATTTTCCCA
ATCATTGCCA TGACCTTAAC GCTCGCCGCG GTTTATTTGC CGATTGGATT AATGTCTGGC
TTAACCGCCG ATCTGTTTAG GCAATTCTCC TTTACCTTAG CTGCCGCTGT GATTATCTCC
GGCATGGTGG CGTTGACCTT ATCGCCGATG ATGAGTGCTT ATCTTATCAA TACCACTGAG
CAGCAGCCTA AATGGTTTAG CCGAGTCGAA GGTGCGCTGC AGCAGTTAAA TCATTTATAT
ATCAATGAAC TCAGTAAATG GTTTACCCGT AAGCGCCAAA TGCTCGGGAT GGCCTTGGTG
CTTATGGGTC TTGCGGGCAT CGCCTATTGG CAGTTGCCTA AGATACTCTT ACCCGTAGAG
GATTCAGGCT TTATCGATGT GGCGGCTAAT GGCCCTACGG GCGTGGGGCG GGAGTATCAT
TTGGACCATA ATAGCGAGCT TAATGGTGTG ATTGACGGCC ATCCTGCGGT GGGGGCGAAT
CTGTCCTATA TCGAGGGTGA GCCCGTCAAT CATGTGCTGC TTAAACCTTG GGGGGAGCGT
CGTGAGGGGA TAGATGAAGT GATCGCTGAT TTGATCGCTA AATCGAAGGA AAGCGTTTCT
GCCTATAATA TGTCCTTCAC CATCCGCTCG GCGGATAACC TAAATATTGC TACCAATGTA
CGCTTGGAAC TCACGACCTT AGACCGTAAC AAGGATAAGT TGAGTGAGAC GGCTGCCAAG
GTGCAAAAGC TTATGGAGGA TTACCCGGGT TTAACGAATG TGGGTAACTC AGTACTAAGG
GATCAACTGC GCTACGATCT ATCTATCGAT CGTAATGCCA TTATCCTCTC TGGGGTGAGC
TATGGCGATG TAACGAATGC ACTCTCGACA TTTTTAGGCT CAGTAAAAGC GGCGGATTTA
CACGCTACCG ATGGGTTTAC CTATCCCATT CAAGTGCAAG TTAATTTAGA TAAGCTCAGT
GATTTTAGGG TAATGGATAA ACTCTATGTC ACCTCTGAAT CAGGTCAGGC TCTGCCACTG
TCACAGTTTG TGTCGATTAA TCAGACCACC GCAGAATCTA ATATAAAGAC CTTTATGGGC
CTCGATAGCG CGGAGTTGAC GGCGGATATT ATGCCCGGTT ATTCCACCGA TGAAATCAAA
GCCTACTTAG ACGAACAGCT ACCAACCCTG CTCACCGATG CTCAGGGCTT TAAATACAAT
GGTTTAATAA AGGAACTGAT GGATTCACAG GCGGGTACTC AGTCGTTATT TTTGTTGGCA
CTGGTGTTTA TCTATCTGAT TTTGGCTGCG CAGTTTGAAA GTTTTGTCGA TCCCTTAATC
ATTCTGCTCA CAGTTCCCTT ATGTATTGTT GGCGCGCTGT TGACCTTGAC CTTGTTTGGT
CAGAGTCTAA ATATCTACTC ACAAATTGGG TTACTAACTC TAGTTGGGCT AGTGACTAAG
CACGGTATCT TGCTAGTGGA ATTTGCCAAC AAGCAGCAAC TTCAAGGCTT GAGCGCGATT
GAGGCGGCGC AGAGCAGTGC CAAGTCGCGT TTAAGGCCGA TTCTTATGAC CTCACTCACC
ATGATTTTAA GTGCTATTCC CTTAGCGCTG GCCTCGGGCC CGGGCTCGTT AGGGTTAGCC
AATATAGGCT TGGTCTTAGT GGGTGGTTTA TTAGCAGGCA CTTTCTTCTC ATTATTTGTG
GTGCCTGTGG CCTATGTCGC TATGGCCGAG TTAAAGGCAA GGGATGTATA CCCAAGTTAC
CTGAAGATGC AGGATTCAGC GGCTGATTTT AATGATTAA
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| Protein sequence | MRLPEVCIRH PIFASVLSIM AVLLGLIAFH KLDIQYFPEH TTHSASVNAS IAGASADFMS
SNVADKLVAA ASGLDKVDTM STDCSEGRCS LTIKFKDDTT DIEYTNLMNK LRSSVEGIND
FPQSMIDKPT VTDDTSATDS ASNIITFVNT GGMEKQAMYD YISQQLVPQL KQVQGVGAVW
GPYGGSQKAV RVWLNPEQMK ALNIKAADVV GTLGSYNASF TSGAIKGKSR DFSINPLNQV
ETLEDVKDLV IKVSDGKIIR VSDVAEVVMG EESLSPSLLS IGGHSAMSLQ ILPLSNANPV
TVASNIKAEI ARMQKHLPQG LEMNLAYNQA DFIEAAIDEG FAALIEAVIL VSLIVVLFLG
SLRAASIPII TIPVCVIGVF AVMSALGFSI NVLTILAIIL AIGLVVDDAI VVVENCYRHI
ENGETPFNAA INGCQEIIFP IIAMTLTLAA VYLPIGLMSG LTADLFRQFS FTLAAAVIIS
GMVALTLSPM MSAYLINTTE QQPKWFSRVE GALQQLNHLY INELSKWFTR KRQMLGMALV
LMGLAGIAYW QLPKILLPVE DSGFIDVAAN GPTGVGREYH LDHNSELNGV IDGHPAVGAN
LSYIEGEPVN HVLLKPWGER REGIDEVIAD LIAKSKESVS AYNMSFTIRS ADNLNIATNV
RLELTTLDRN KDKLSETAAK VQKLMEDYPG LTNVGNSVLR DQLRYDLSID RNAIILSGVS
YGDVTNALST FLGSVKAADL HATDGFTYPI QVQVNLDKLS DFRVMDKLYV TSESGQALPL
SQFVSINQTT AESNIKTFMG LDSAELTADI MPGYSTDEIK AYLDEQLPTL LTDAQGFKYN
GLIKELMDSQ AGTQSLFLLA LVFIYLILAA QFESFVDPLI ILLTVPLCIV GALLTLTLFG
QSLNIYSQIG LLTLVGLVTK HGILLVEFAN KQQLQGLSAI EAAQSSAKSR LRPILMTSLT
MILSAIPLAL ASGPGSLGLA NIGLVLVGGL LAGTFFSLFV VPVAYVAMAE LKARDVYPSY
LKMQDSAADF ND
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