Gene Sputcn32_3249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3249 
Symbol 
ID5080090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp3776287 
End bp3777432 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content47% 
IMG OID640500446 
Productgalactokinase 
Protein accessionYP_001184760 
Protein GI146294336 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0153] Galactokinase 
TIGRFAM ID[TIGR00131] galactokinase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAACC CTGCGCAGCG CGCCACTAAG TTATTTGTCC AAACCTTTGG CACTAAAGCC 
GATGATTTAT ATCAAGCCCC AGGCCGAGTC AATTTGATCG GCGAATATAC TGATTACAAC 
GATGGTTTTG TATTACCAGC AGCCATTAAT TTTCATACCG TTATTGCGGT TAAGCGTCGT 
GAAGATACCA AGTTTCGCGC CGTTACCGAT GCCTTTCCTG GACAACTCAA AGAGTGGACC 
TTCGGCCAAG AGGGGCATAT TGATCCGGCT GATGGCTGGG TGAATTATCT AAAAGGACTC 
ACAGCGGCCA TGGCTCACAC AGGCCTATTA GCAAAAGGAC TGGATTTAGC CATAGTGGGT 
GATGTTCCTT TAGCTGCGGG TTTATCTTCT TCAGGGGCGC TTGTGGTTGC TTTTGGCACC 
GCAATCAGTG ATAGCAGCCA ACTACACTTA TCCCCCATGG CAGTCGCGCA ATTAGCCCAG 
CGTGGTGAGC ATAGATATGT TAAATCGGCC TGCAGCATTA TGGATCATAT GATCAGTGCC 
ATGGGTGAGC AGGACCACGC TTTACTGATC GACTGTTTGG ATCTCGACAG TGAAGCCATT 
TCGATCCCCG AAAATTTAAG CCTTATCATC ATAGATGCTC ATATTGAAAA ACAGCGTTTA 
GCGGCCACCA ATCAACAACG CCGCGATGAG TGTGCTCAAG CTGCTGAATA TTTTGGTTTA 
GATGCATTGC GCCACTTGGA TTTGCGTCAG TTAGAAAGTG CTAAAGATAA ATTAACTGAC 
ACTCTATATC GCCGCGCCAA ACATGTAGTG ACCGAGAATA AACGCACTCA GAGTGCTGCG 
CGCGCACTCG AACAAAATAA TATCACTAAA TTTAGCCAGT TAATGGCGCA ATCCCATGCC 
TCACTCAGGG ATGATTTTGA AGTGACCTTG CCCGAATTTG ACACCTTAGT TGACATTGTT 
GGCCAAGTGA TAGGAGTACG TGGCGGCATA CGTATGACAG ATGGTTGTGT CGTGGCTTTA 
GTGGATCATG AACTTACCGA TGAGGTCGTT GCGGCTGTAG AGCATGATTT TTTCGAGAAA 
ACAGGGATCG ATGCCACAGT CTATTTATGT TCTGCAAGTG CTGGAGCGGG TCGTATCGAT 
AACTAG
 
Protein sequence
MSNPAQRATK LFVQTFGTKA DDLYQAPGRV NLIGEYTDYN DGFVLPAAIN FHTVIAVKRR 
EDTKFRAVTD AFPGQLKEWT FGQEGHIDPA DGWVNYLKGL TAAMAHTGLL AKGLDLAIVG 
DVPLAAGLSS SGALVVAFGT AISDSSQLHL SPMAVAQLAQ RGEHRYVKSA CSIMDHMISA 
MGEQDHALLI DCLDLDSEAI SIPENLSLII IDAHIEKQRL AATNQQRRDE CAQAAEYFGL 
DALRHLDLRQ LESAKDKLTD TLYRRAKHVV TENKRTQSAA RALEQNNITK FSQLMAQSHA 
SLRDDFEVTL PEFDTLVDIV GQVIGVRGGI RMTDGCVVAL VDHELTDEVV AAVEHDFFEK 
TGIDATVYLC SASAGAGRID N