| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3222 |
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| Symbol | |
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| ID | 5080063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 3748919 |
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| End bp | 3749827 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640500419 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001184733 |
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| Protein GI | 146294309 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAGA TTGCCGCAAT ACGCAGTTTT GTCGAGGTGG CAAACTGTGG AAGTTTTACT
AAGGCCGCCC AACACCTCGA CCTAAGTCGA CTACAGGTTT CGCGCCATAT TCAGGAAATT
GAACAATGGC TCAATTTACG CTTATTACAC CGAACGACCC GTAGCGTAAG CCTAACGCTA
CAGGGTGAAG AGACCTTGCA GTATTGCCAG CGCTTGCTCA GTGAAGTTGC CGCGATGGAG
AGCCGTGCAC ATAGTCATAA TACTGAACTT GTTGGAAGCA TCAGAATCGC AACCCCCATA
GGGCTGGGGC AGCACAGCTT ATTCGACGTG GTCGATCGCT TTATTAAACT TCATCCTAAG
GTCAATATCC AACTGGCGAT GTCGGACAGT TTTGCCCAAT TGGTCGATGA ACGGGTTGAT
GTGGCACTGC GATACACCGA ACAGCCCGAT GAGAATTTGA TTGCGCGGCG TTTAATGATG
ATAGATGCAG TGGTTTGCGC TGCACCAACT TATCTTGCTA ATACAAGCCC CTTAAACGAA
CCGATTGATT TACTAACACA TAATTGCCTT GTCCACACGG CGCAGCACAG TTGGCATTTT
CTAAAAGAAA AACAAAGTGA AGTCATCAAA GTCACTGGTA ACCTCAAAGC CAACGATATG
GGGGTATTGG TTAGCGCAGC ACTGAGGGGG CACGGCATTG TACGTCTCCC CTGTGACTTG
GCCAATCAGT ACCTTGCCAG TGGCCAACTT CAGGAAGTTT TACCCGACTT TACGGCTCCA
GGCCAAACTC TATGGGCCGT CTATTTATCC CGAAGTTATC AGCAGATGTT AGTCAGAGCG
TTTATCGATT TCACCGCTCA GCAATGGCAA CTCGATATCA AGAAATGGAC ACCCGCCCAT
CTGATTTAA
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| Protein sequence | MDKIAAIRSF VEVANCGSFT KAAQHLDLSR LQVSRHIQEI EQWLNLRLLH RTTRSVSLTL
QGEETLQYCQ RLLSEVAAME SRAHSHNTEL VGSIRIATPI GLGQHSLFDV VDRFIKLHPK
VNIQLAMSDS FAQLVDERVD VALRYTEQPD ENLIARRLMM IDAVVCAAPT YLANTSPLNE
PIDLLTHNCL VHTAQHSWHF LKEKQSEVIK VTGNLKANDM GVLVSAALRG HGIVRLPCDL
ANQYLASGQL QEVLPDFTAP GQTLWAVYLS RSYQQMLVRA FIDFTAQQWQ LDIKKWTPAH
LI
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