| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3219 |
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| Symbol | |
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| ID | 5080060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3746359 |
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| End bp | 3747294 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640500416 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_001184730 |
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| Protein GI | 146294306 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0039] Malate/lactate dehydrogenases |
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| TIGRFAM ID | [TIGR01772] malate dehydrogenase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00681526 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTTG CTGTACTTGG TGCTGCTGGT GGTATCGGCC AGGCTCTTGC CCTACTGTTA
AAAACTCAAT TGCCTGCGGG TTCTAAACTG TCTCTATACG ATATCGCACC GGTGACTCCG
GGTGTTGCGG TTGACTTGAG CCATATTCCA ACTGCGGTTG AGATCAAAGG TTTTGCTGGT
GAAGATCCAA CGCCTGCCCT CGTGGGCGCT GACGTTGTAC TCATTTCTGC AGGTGTTGCA
CGTAAGCCTG GTATGGATCG TTCAGATCTG TTCAATATCA ACGCGGGCAT TGTTCGCAAT
CTGATTGAAA AAGTGGCTGC GACTTGTCCA AAAGCACTTG TTGGTATCAT TACTAACCCT
GTGAATACGA CAGTTGCTAT CGCTGCTGAA GTGATGAAAA AAGCAGGTGT TTACGATAAG
AACCGTCTAT TCGGTGTGAC CACTCTGGAC GTTATCCGTT CTGAAACTTT CATCGCTGAA
TTAAAAGGCT TAAACGTTGC TGACGTTAAA ATCAACGTGA TCGGCGGCCA CAGCGGTGTG
ACCATTCTGC CATTACTGTC TCAAGTTGAA GGCGTGACTT TCTCCGATGA AGAAGTCGCT
TCTTTAACTA AACGCATTCA AAACGCGGGT ACTGAAGTGG TTGAAGCTAA AGCAGGTGGC
GGAAGCGCGA CTCTGTCTAT GGGCCAAGCG GCTTGCCGTT TCGGTATGTC TCTGGTTCGT
GGTCTGCAAG GCGAAGCGAA TGTCGTTGAA TGTGCCTACG TTGATGGCGG CAGCGAACAC
GCTGAATTCT TCGCACAACC TGTGCTATTA GGCAAAAACG GTATCGAAAA AGTACTGCCT
TACGGTGAAG TGAGTGCATT TGAAGCTAAC GCCCGTGATT CTATGTTAGA TACGCTGAAA
GGCGATATCA AACTAGGCGT TGATTTCGTT AAATAA
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| Protein sequence | MKVAVLGAAG GIGQALALLL KTQLPAGSKL SLYDIAPVTP GVAVDLSHIP TAVEIKGFAG
EDPTPALVGA DVVLISAGVA RKPGMDRSDL FNINAGIVRN LIEKVAATCP KALVGIITNP
VNTTVAIAAE VMKKAGVYDK NRLFGVTTLD VIRSETFIAE LKGLNVADVK INVIGGHSGV
TILPLLSQVE GVTFSDEEVA SLTKRIQNAG TEVVEAKAGG GSATLSMGQA ACRFGMSLVR
GLQGEANVVE CAYVDGGSEH AEFFAQPVLL GKNGIEKVLP YGEVSAFEAN ARDSMLDTLK
GDIKLGVDFV K
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