| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3217 |
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| Symbol | |
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| ID | 5080058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3744882 |
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| End bp | 3745601 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640500414 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001184728 |
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| Protein GI | 146294304 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00454323 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATCTC CCATCATCAT CACAGGCGTG GGTAAGCGTA TCGGATACGC CTTAGCCAAA
CATCTTCTTG CCCAAGGTCA TAGTGTGATT GGCACCTATC GTAGCCATTA TCCGAGTATT
GATAAGCTGC GGGTTTTGGG CGCGACTTTA ATTCAATGTG ACTTTTACGA CAATGTTCAG
GTACAAGGCT TAATTGATCA ATTGGGCCAG TATCCAAAGA TCCGCGCCAT TATCCATAAC
GCCTCGGATT GGTTGGCGGA TAGCAGTCAA ACCTTTACTG CCAGTGAAGT GATACAGCGG
ATGATGCAGG TGCACGTAAG CGTACCTTAT CAATTGAATT TGGCGTTAGC ATCGCAGTTG
CAAGCGGGAG CAGAAGAGGA GATTGGTGCC AGCGATATCA TCCATATCAC CGACTATGTG
GCCGAAAAGG GCAGTGCTAA ACATATCGCT TATGCCGCCA GTAAAGCGGC GCTACATAAT
TTAACTTTGT CCTTTGCGGC TAAATTCGCC CCCGAAGTGA AAGTCAATTC GATTGCACCA
GCGATGATCC TATTTAATCA AGGCGATGAT GAAGCCTATC AGCAAAAAAC CTTAGCTAAA
GCACTACTGC CAAAAGAGGC GGGGAATGAA GAGATTATCG ACTTAGTGGA ATATCTGCTA
AATAGCCGCT ATGTCACGGG GCGCAGCCAT CATGTCGATG GTGGTCGGCA TTTAAGGTAA
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| Protein sequence | MTSPIIITGV GKRIGYALAK HLLAQGHSVI GTYRSHYPSI DKLRVLGATL IQCDFYDNVQ
VQGLIDQLGQ YPKIRAIIHN ASDWLADSSQ TFTASEVIQR MMQVHVSVPY QLNLALASQL
QAGAEEEIGA SDIIHITDYV AEKGSAKHIA YAASKAALHN LTLSFAAKFA PEVKVNSIAP
AMILFNQGDD EAYQQKTLAK ALLPKEAGNE EIIDLVEYLL NSRYVTGRSH HVDGGRHLR
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