| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3176 |
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| Symbol | |
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| ID | 5080119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3700626 |
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| End bp | 3702587 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640500373 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001184687 |
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| Protein GI | 146294263 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAACAA ATCCAACTAA AATCGCGCTG CTGATCGGCA GCCTTTGCAG TTTTTCAATT
ATCGCGCCCG CTCTGGCGGC CGACGATACC CATACCGCTA GAGTCGATGA GCATCTTGTC
GTGATTGGCC GTACAGACAA TACCCCGCTA AACATTGCTG CCAATGTGAA TGTGATTGAT
GCCGCTGCAA TTGAAATGAG CGGTGCAACG AGTTTGACTG ATGTACTACG CGGTCGAAGC
GGTATTCAAA TTTCGGATAA TAATATTGGG ACTAGCTTTG CGATGCGCGG TTTTAGCGCC
AGCACTGCTG TTAACAATAC ACTGATTTTA CTCGATGGCC GTCGTCTGAA TAATATCGAT
ATCGCTGCGC CAAGCCTCAA TGCGATTCCG CTTAACCTTG TTGAACGTAT TGAGATTTTA
TCGGGCAGTG CGGGTGTGCT TTATGGCGAC CAAGCTGTCG GTGGGGTGAT TAACATTGTG
ACTAAGTCAC CCGAAAACAC TAGCGGCAGT GTGCAATTAT CGGGTGGCAG CTTTGATACC
TATGAAGGTC GCGGTGATAT ATCTGGCGCC ATCAATAAAG ACTGGCGTTA CTTTTTTACA
GGTAGCTACA ACCAAGGTGA TAACTATCGC AAGCATAATG CCAATGAAAC TGGCTCAATT
TTAGGCCGTA TTCAATATAA AACTGATACA GATGCTTTTT TTGTTGAAAC CAGTTATTAC
GATGATGACC GTGAAAATCC CGGTTCACTT ACCAAAGATC AATTTAAACA AAACCCTCGT
CAATCTTCCA ATAAAAGCGA ATATGTCCAT GAGATGACCA CAGCGGCGCG CAGTGGTTAT
GAGCATCAGC TTAACCCAAA TTGGGCCTTA GCGGCGGATC TGGATTATAG CGATACCTTA
GTGACCTCGC TGAACTGGGG GGCAGGTAGT CATAATACCC GTTCTCTCTT AATGTTTAGT
CCTAAGGCCT TAGCAAATTA CACCACTCGC CAAGGTGAGC TAAATCTAGT GGCAGGTTTA
GATCTTAGCC GTGGTAAGGC CGACTATAAC ACTATGGCGC GTAGCAATGT GCAAGAAATG
CAAAGTGCTT ATGTACAGGC CACAGTGCCA TTAAGCCACA GCTTAAGCTA TGTGGTAGGT
GGACGTTATG CGCGGGTGAC CGACGAGTTA GTCGATGGCA ATGTCTATCC AAATGGTATT
GATTTAGATG AAGATGCCAC TGCATTCGAG TTCGGTCTAA ACTATCGCCC AAGCGCCGAG
CACCGATTCT ATCTACGCGG CGATGAAAAC TTCCGTTTCG CTAAGGTCGA TGAGCAAGCC
TACACCCCGA AAGATGTCTA TGGCCTAAAG CCGCAGACGG GCCGCTCCTA TGAGGCGGGT
TGGGATTGGA CTGTTGCTAG CCAAAGCCTG CGCGTAAGCT TATACCGCCT CGATTTAGAA
GATGAAATTG TCTTCGACCC CAGTGCGGAA AAACCTGTTG GTGGTAGTTT CCAAGGCGCG
AACGTCAATG CCGATGCCTC ACTCCGTTAT GGTGCGAGCG CAGACTGGGA TTGGCAGATC
ACTCAAGCAC TGCAATTAGG GCTTGAATAT AACTATATCG ATGCCGAATT TACCGATGGG
GTGAATGATG GTAAAGCACT GTCTTGGGTG GCAAAACATA CTGGACGTGG TTATATCAGT
ATGGATTTCG CCGAGCATTT CCAAGTGTTT GCCGAGGCGA TTTATACGGG TAATCGTTTT
ATTGAAGGCG ATAATGCTAA TGAAGGCGAT AAGCTGGCAA GTTATGTGCT CGGTAATTTA
GCCTTAAATT ATAATCGTGA TGCTTGGTTA GCGAGTCTAC GCGTCGATAA TTTGTTCGAT
AAAGAATATG TTAGCTCAGG TTATTATGGT GGTGGTTTGT GGGATAGTTA TTATTCTGGC
CGAGGCCGTG ATATCCGTCT AACCTTAGGT TATCGCTTCT AA
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| Protein sequence | MGTNPTKIAL LIGSLCSFSI IAPALAADDT HTARVDEHLV VIGRTDNTPL NIAANVNVID
AAAIEMSGAT SLTDVLRGRS GIQISDNNIG TSFAMRGFSA STAVNNTLIL LDGRRLNNID
IAAPSLNAIP LNLVERIEIL SGSAGVLYGD QAVGGVINIV TKSPENTSGS VQLSGGSFDT
YEGRGDISGA INKDWRYFFT GSYNQGDNYR KHNANETGSI LGRIQYKTDT DAFFVETSYY
DDDRENPGSL TKDQFKQNPR QSSNKSEYVH EMTTAARSGY EHQLNPNWAL AADLDYSDTL
VTSLNWGAGS HNTRSLLMFS PKALANYTTR QGELNLVAGL DLSRGKADYN TMARSNVQEM
QSAYVQATVP LSHSLSYVVG GRYARVTDEL VDGNVYPNGI DLDEDATAFE FGLNYRPSAE
HRFYLRGDEN FRFAKVDEQA YTPKDVYGLK PQTGRSYEAG WDWTVASQSL RVSLYRLDLE
DEIVFDPSAE KPVGGSFQGA NVNADASLRY GASADWDWQI TQALQLGLEY NYIDAEFTDG
VNDGKALSWV AKHTGRGYIS MDFAEHFQVF AEAIYTGNRF IEGDNANEGD KLASYVLGNL
ALNYNRDAWL ASLRVDNLFD KEYVSSGYYG GGLWDSYYSG RGRDIRLTLG YRF
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