| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3173 |
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| Symbol | |
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| ID | 5080116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 3697154 |
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| End bp | 3698059 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640500370 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001184684 |
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| Protein GI | 146294260 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0079235 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGAAC TAAGACACCT GCGAACCTTA ATGGCCCTGA AAGAAAGCGG CAGTTTGGCG
GGCGCGGCCA AAAAACGTTT TGTCACTCAA TCCGCCCTCT CCCACCAGAT TAAGGAGTTG
GAACAACGAA TTAACTCACC CATTTTTGTG CGTAAGAGTA AGCCACTGTC ATTCACCCAA
GAAGGTGCAC GCCTGTTGCA TCTGGCCGAA GAGATTTTGC CTAAGGTGTT AGAAACCGAG
ACAGATTTGA AGAATGGGCT AGAAACTGAA ACCAATCAGT TGCGCGTCGG CATTGAGTGC
CATAGCTGTT TTCGCTGGTT AATGCCTGTG ATGGAGCAAT TTAGGCAAGA TCATCCAGCA
GCCGAGTTAG ACTTGTCGAG CCGTCACCTG TTCGACTCGC TCAATGCCCT AGAAATGGGT
GAACTGGATA TTGTATTAAC CTCAGATCCT GTGCCTGGGC ATTCACTCGC CTACCAGCAT
TTGTTTGATT TTGAAGTGAA GTTAGTGGTT GCAAAAGATC ATCCCTTAGC AAAAGAAGCC
TATGTCACCC CTAAGCAATT AGCACACTTG CCTATTATCA GTTATCCGGT GCCGTTGACG
CGTTTAGATA TTTATCGCCA TTTTTTAGAG CCTGCGGGCA TAGAGGCAGG CGAGCAAAAA
ACCTGTGATT TAACCATGAT GTTATTGCAA CGCATCGCCT GTAAAGACGG CATAGCCGCA
CTGCCAAGTT GGTCGATAAA TGAAGGACAT GGACTGAGTC TCGCCACGGT AAAACTCGGC
CAAGAAGGCT TAAAACGCCC GCTATTTGGC GCCTATCGCC GCCACAGCGC AAACTCAGCA
TTGATCCAAA ATTGGTTACA ACTGGTGGCG AGTGAAGGTT TATCCCGCCA GCATAAATCT
AATTGA
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| Protein sequence | MIELRHLRTL MALKESGSLA GAAKKRFVTQ SALSHQIKEL EQRINSPIFV RKSKPLSFTQ
EGARLLHLAE EILPKVLETE TDLKNGLETE TNQLRVGIEC HSCFRWLMPV MEQFRQDHPA
AELDLSSRHL FDSLNALEMG ELDIVLTSDP VPGHSLAYQH LFDFEVKLVV AKDHPLAKEA
YVTPKQLAHL PIISYPVPLT RLDIYRHFLE PAGIEAGEQK TCDLTMMLLQ RIACKDGIAA
LPSWSINEGH GLSLATVKLG QEGLKRPLFG AYRRHSANSA LIQNWLQLVA SEGLSRQHKS
N
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