Gene Sputcn32_3168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3168 
Symbol 
ID5080111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp3688463 
End bp3689551 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content41% 
IMG OID640500365 
Productdiguanylate cyclase 
Protein accessionYP_001184679 
Protein GI146294255 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAGCT TGATTACAAC GACTGGAGCA AAAGATGACG AGCTTAGTGC CCATTCTGCT 
GCGGCATCCC AAGAAGCACT GCAACTACTC AATGGTATTA GGCCATTTTC TATTACCATA 
AATGGCATTT TTGCCATCCT GTTTGTATTT TTATCCGTAT GGCCTTTAGC ATTTATTTAT 
ACCTTAGGGT TAAGCTATCA CCTTTGGTTA AGCTACTGTG CTCACTCTCA CCCTAAACAA 
TTACCACCAA TTATTCAGTG GTCTTGGGTG GTGGTATTTA GTCAATCTCT ATCGTCAGTA 
CTCATTTTAG GTGCTGATGC TGGATTTCAA TATTATCTTC TTGCGACTAT ACCACCATCA 
TTTGCAAGTA TTTTTAAGCC ATTATTTTAT AAACTAATAC AAGCTTTGAT CATCATAGTC 
TTCTTTCTTA TTTGTGATAT TTGGTTTATT GATTACGAGC CTTATTATCT TTATTCCGAT 
GAAATGATTA GTTTATTTCG CCATATCAAT GTGCTCGGTG CGTGTGCTTT GCTCGCCGGT 
GTATCCTATG CGTATTCACA AATTGTAATG TCAGCCATTA CTGCGCTACG TAATGTGGCT 
AATACAGATG AGTTAACAGG GCTGATTAAC CGCCGGAGCT TAACTGCACT TATTGATCGA 
GAAGCGGCAA GAACATTACG TACGCACGCA TCGATGAGCT TAGTTTTATG TGATATTGAT 
TATTTTAAAC GTATTAATGA TAGCTATGGT CATGCTGCTG GCGATCATGT GTTGGTTAAT 
GTCGCTAATT TATTACAGGG AGTGTTGAGG GAATATGATG TAGTTGCACG TTGGGGAGGA 
GAGGAGTTTT TATTGCTGCT ACCCAATACG GATATAATAG AAGCGATGAA AGTCGCTGAG 
CGATTACGCG AAATTGTTGC TTGTAGCCAC CTCAGCTTTG AAGAGCAAAC GATACCTGTG 
ACTATGACAC TCGGTGTTGC CGTTTTAGGG GATGAAAATT GGCACAGCAC GTTAGCACGT 
GCTGATGAAG CGCTTTATCG TGGTAAAAGA CAAGGTCGAA ATTGTGTTGT GCAGGCATCA 
GCCCCGTGA
 
Protein sequence
MQSLITTTGA KDDELSAHSA AASQEALQLL NGIRPFSITI NGIFAILFVF LSVWPLAFIY 
TLGLSYHLWL SYCAHSHPKQ LPPIIQWSWV VVFSQSLSSV LILGADAGFQ YYLLATIPPS 
FASIFKPLFY KLIQALIIIV FFLICDIWFI DYEPYYLYSD EMISLFRHIN VLGACALLAG 
VSYAYSQIVM SAITALRNVA NTDELTGLIN RRSLTALIDR EAARTLRTHA SMSLVLCDID 
YFKRINDSYG HAAGDHVLVN VANLLQGVLR EYDVVARWGG EEFLLLLPNT DIIEAMKVAE 
RLREIVACSH LSFEEQTIPV TMTLGVAVLG DENWHSTLAR ADEALYRGKR QGRNCVVQAS 
AP