Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3161 |
Symbol | |
ID | 5078505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 3680042 |
End bp | 3680773 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640500358 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_001184672 |
Protein GI | 146294248 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000117714 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGAGTCC CAAGAATTTA TCAACCTCAG CCATTAGCTA TCAATCAACT GCTGAACTTA GACGAAGATG GCGCGGCCCA TATCGGCAAA GTGTTACGCA TGGGCAACGG TGAAAATATC AGTCTATTCA ATGGCGATGG CAATGATTAT CTTGCTGAAA TTGTTGATGC AGGTAAAAAG CATGTCACAG TAAAATTGCT CTCCTGTGAG GCAAATTTAT CAGAATCGCC ACTCAACTTG CACTTAGGCC AAGTGATTTC CCGTGGCGAT AGAATGGAGT TCACCATTCA AAAATCCGTC GAGCTTGGCG TGAATACGAT TACGCCGCTG TTTTCTGATC GCTGCGGCGT GAAACTCAAC GGTGAACGCC TAGAGAAAAA AATTCAACAA TGGCAGAAGA TCGTCGTGAG CGCCTGTGAG CAATCGGGAC GCAGTCAAGT GCCCGTGGTT CGCCCAGCGA TGGACTTACA CGATTGGTGC AGTGAGCCGA CCTCGGCACT TAAACTCAAT CTGCATCCAC GTGCCGCACA CGGTATCAAT GGCTTAGATT TGGCCCATAC CCGCGTGCGT TTATTAATTG GCCCTGAAGG CGGTTTGTCG GCGGAAGAAA TCGCCATGAC AGAAACCTAT CAGTTTACCG ATGTGTTGCT TGGCCCCAGA GTGCTACGCA CCGAAACCGC CTCGCTCACC GCCATTACAG CACTGCAACT TAGATTCGGT GATTTAGGCT GA
|
Protein sequence | MRVPRIYQPQ PLAINQLLNL DEDGAAHIGK VLRMGNGENI SLFNGDGNDY LAEIVDAGKK HVTVKLLSCE ANLSESPLNL HLGQVISRGD RMEFTIQKSV ELGVNTITPL FSDRCGVKLN GERLEKKIQQ WQKIVVSACE QSGRSQVPVV RPAMDLHDWC SEPTSALKLN LHPRAAHGIN GLDLAHTRVR LLIGPEGGLS AEEIAMTETY QFTDVLLGPR VLRTETASLT AITALQLRFG DLG
|
| |