Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3160 |
Symbol | |
ID | 5078504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 3679254 |
End bp | 3680033 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640500357 |
Product | deoxyribonuclease I |
Protein accession | YP_001184671 |
Protein GI | 146294247 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2356] Endonuclease I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000648022 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGAACA AAGCCTCTTT AACCGTTTAT TCACGGCGAC TTTTGCTGTG CTTCATCACT TGGTCGGTGA CCCTATCTGT CCCCACAAGT GCATCACCAT CACACCCCAA TAGTTTCAGC CAAGCGAAAA CTAAGTCGCA GACGCTTTAT GCTGGCAATC GTCAAGGTAT GCTGCCCGCA GTCAGCTTTT ATTGCGGCTG TGACATTCAG ATTAAAGGCA AATCGTGGAA ACCCGATCTC ACCAGTTGTG GTTACCAAGT CCGTAAACAG GAAACTCGTG CTAACCGTAT CGAGTGGGAG CACATAGTGC CCGCCTGGGA ATTTGGCCAT CAACTCCAAT GCTGGCAAAA GGGTGGTCGT AAAAACTGCG CCGATAACAG CAATGAATTT AATAAGATGG AGGCAGACAT GCACAACTTA GTGCCCGCCA TAGGTGAAGT GAATGGTGAT CGCAGTAATT TCCGTTTTAG CGAATGGAAC GGTAAAGCCA ATCAATATGG TCAATGTGCT ATAGTTGTCG ACTTTAAGAA TCGTCAGGTA CAGCCACCCG CGAATACCCG CGGTAAGATA GCCAGAACCT ACCTGTATAT GCAGCAGACC TATGGTCTTA AAATTGCCTC TAGCCAATTA AAATTATTTA AGGCATGGGA TAAAACCTAT CCAGTTGATA CTATTGAGTG CCAACGTGAT AACGCCATAG CGCAGGTTCA AGGCAACCAT AACCCCTTTG TGCAGAATGC CTGTAATGCG CCACCACAGC GTCAACAATT AGCCGAGTAA
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Protein sequence | MLNKASLTVY SRRLLLCFIT WSVTLSVPTS ASPSHPNSFS QAKTKSQTLY AGNRQGMLPA VSFYCGCDIQ IKGKSWKPDL TSCGYQVRKQ ETRANRIEWE HIVPAWEFGH QLQCWQKGGR KNCADNSNEF NKMEADMHNL VPAIGEVNGD RSNFRFSEWN GKANQYGQCA IVVDFKNRQV QPPANTRGKI ARTYLYMQQT YGLKIASSQL KLFKAWDKTY PVDTIECQRD NAIAQVQGNH NPFVQNACNA PPQRQQLAE
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