Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3154 |
Symbol | |
ID | 5078498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3667622 |
End bp | 3669715 |
Gene Length | 2094 bp |
Protein Length | 697 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640500351 |
Product | elongation factor G |
Protein accession | YP_001184665 |
Protein GI | 146294241 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0480] Translation elongation factors (GTPases) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00484] translation elongation factor EF-G |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000051485 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGAAT TATCCAAATA CAGAAACATT GGTATCTTCG CTCACGTTGA CGCGGGTAAA ACCACGACCA CCGAGCGTAT TCTTAAGCTA ACTGGTAGAA TTCACAAAGC TGGTGAAACA CACGATGGTG AATCTACAAC AGACTTCATG GTTCAGGAAG CTGAGCGCGG TATTACCATT CAATCAGCAG CAGTAAGCTG TTTCTGGAAA GAACACCGTT TCAACGTTAT TGATACCCCA GGGCACGTTG ACTTCACCGT TGAAGTTTAC CGTTCTCTGA AAGTACTCGA CGGCGGTATA GGTGTATTCT GTGGTAGCGG CGGTGTTGAG CCTCAATCAG AAACTAACTG GCGCTATGCT AACGAATCTG AAGTTGCTCG TATCATCTTC GTAAACAAGT TAGACCGTAT GGGTGCTGAC TTCCTGCGTG TTGTTAAGCA GACTAGAGAT GTTTTAGCGG CTAACCCACT GGTTATGGTT CTGCCTATCG GTATCGAAGA CGAGTTTAAA GGTGTTGTTG ACCTATTAAC CCGTAAAGCC TACATATGGG ATGATTCAGG TTTACCAGAA AACTTCAGTG TGACAGACGT TCCAGCTGAC ATGGTTGATC AAGTTGAAGA ATACCGTGAA ATGCTGATCG AATCTGCTGT TGAGCAAGAT GACGATCTGA TGGAAGCCTA CATGGAAGGC GAAGAGCCAT CGATTGAAGA CCTGAAACGT TGTATCCGTA AGGGTACTCG TACAATGGCT TTATTCCCAA CATACTGTGG TTCTGCGTTC AAGAACAAGG GTATGCAACT GGTTCTAGAC GCTGTTGTTG ATTACTTACC AGCGCCAAAC GAAGTTGATC CACAACCTTT AACAGACGAA GAAGGTAACG AAACTGGCGA ACACGCTATC GTTTCTGCCG ATGAGCCATT GAAAGCGTTA GCGTTCAAAA TTATGGACGA CCGTTTCGGT GCTCTGACCT TCGTACGTGT TTATTCTGGC CGTTTGAAGA AAGGCGATAC CATTCTTAAC AGTGCGACTG GTAAGACTGA ACGTATCGGC CGTATGTGCG AAATGCACGC AAACGACCGT ATCGAAATTG AATCGGCTGA AGCTGGTGAC ATTATCGCTA TCGTGGGCAT GAAGAACGTG CAAACGGGTC ACACTCTGTG TGATGTTAAG CACCCATGTA CATTAGAAGC CATGGTGTTC CCTGAGCCTG TAATCTCTAT CGCAGTAGCG CCAAAAGATA AAGGTGGTAG CGAGAAGATG GCTATCGCTA TCGGTAAGAT GATCGCTGAA GATCCATCTT TCCGCGTAGA AACAGACGAA GATTCAGGTG AAACCATCCT TAAAGGTATG GGTGAACTGC ACTTAGATAT CAAAGTTGAC ATCTTGAAGC GTACTTACGG CGTTGAGTTG ATCGTAGGTG AGCCACAAGT GGCCTACCGC GAAACCATTA CTCAAATGGT TGAAGACCAA TACACCCACA AGAAACAATC TGGTGGTTCT GGTCAATTCG GTAAGATTGA ATACATCATC CGTCCTGGTG AGCCAAATTC TGGTTTCGTA TTCAAATCTT CAGTTGTGGG TGGTAGTGTT CCTAAGGAAT TCTGGCCTGC AGTTGAGAAA GGTTTTGCGA GCATGATGAA CACGGGTACT ATCGCTGGCT TCCCAGTGTT AGACGTAGAG TTCGAATTAA CTGACGGTGC TTACCACGCA GTTGACTCAT CAGCTATCGC GTTCGAAATC GCTGCTAAAG CGGCATTCCG TCAGTCTATC GCTAAAGCTA AGCCACAACT TCTTGAGCCA ATCATGAAAG TTGACGTGTT CAGCCCAGAA GACAACGTGG GTGATGTGAT CGGTGACTTA AACCGTCGTC GCGGTATGAT CAAAGACCAA ATCGCAGGTG TGACTGGTGT TCGTATTAAG GCTGACGTAC CGTTATCAGA AATGTTCGGT TATATCGGTA CTCTACGTAC AATGACTTCT GGTCGTGGTC AGTTCTCTAT GGAGTTCTCA CACTACACAC CATGTCCAAA CAGCGTAGCT GAAAAAGTAG TTGAGCAAGT TAAAGAGCGT AAAGCTGCTG AAGCTAAGAA GTAA
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Protein sequence | MTELSKYRNI GIFAHVDAGK TTTTERILKL TGRIHKAGET HDGESTTDFM VQEAERGITI QSAAVSCFWK EHRFNVIDTP GHVDFTVEVY RSLKVLDGGI GVFCGSGGVE PQSETNWRYA NESEVARIIF VNKLDRMGAD FLRVVKQTRD VLAANPLVMV LPIGIEDEFK GVVDLLTRKA YIWDDSGLPE NFSVTDVPAD MVDQVEEYRE MLIESAVEQD DDLMEAYMEG EEPSIEDLKR CIRKGTRTMA LFPTYCGSAF KNKGMQLVLD AVVDYLPAPN EVDPQPLTDE EGNETGEHAI VSADEPLKAL AFKIMDDRFG ALTFVRVYSG RLKKGDTILN SATGKTERIG RMCEMHANDR IEIESAEAGD IIAIVGMKNV QTGHTLCDVK HPCTLEAMVF PEPVISIAVA PKDKGGSEKM AIAIGKMIAE DPSFRVETDE DSGETILKGM GELHLDIKVD ILKRTYGVEL IVGEPQVAYR ETITQMVEDQ YTHKKQSGGS GQFGKIEYII RPGEPNSGFV FKSSVVGGSV PKEFWPAVEK GFASMMNTGT IAGFPVLDVE FELTDGAYHA VDSSAIAFEI AAKAAFRQSI AKAKPQLLEP IMKVDVFSPE DNVGDVIGDL NRRRGMIKDQ IAGVTGVRIK ADVPLSEMFG YIGTLRTMTS GRGQFSMEFS HYTPCPNSVA EKVVEQVKER KAAEAKK
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