| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3153 |
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| Symbol | |
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| ID | 5078497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 3666620 |
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| End bp | 3667507 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640500350 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001184664 |
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| Protein GI | 146294240 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00364917 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATTC CAATCAAGAC CTTACAGTGT TTTCTGACCT TAGTGGAAAC CGAAAACTTT
ACCCGTGCAG CACAAAAATG TTTTATCACC CAACCAACGC TTAGCAAGAT CATCCAAAGG
TTAGAGGAAA GTCTAGGAGA AACCCTGCTG ATCCGTAACA ATCAAAAGGT AGAGCTAACC
CAAGCTGGAC AGCTTTTTGA ACATAGTGCG AGAGAGATCC TAGGCCAATG GCATAGGCTA
CAAGAAGACA TGAGTAACTT AAGTGGACTC AAATCAGGGC GATTGCGATT AGGTGTATGT
CCTATGATGA GCAGTCTGAT TATCGGTCTG CTGACGAGTT ATCGTAAGCG TTATCCGGGT
ATTGAACTGC AGATGTATGA ATACGGTGGA TTTGGCTGCG AGCAGGCACT GCTGAATAAC
AGTTTAGATA TCGCCTTTAC TGCGCTACCA ACAACCCATG AAACAGAGCT AGTCAATCAA
CCCTTAACCA AGTATCCATT ACTCGCTTGT TTGCCAGAGG GACATCCTCT AGCCGATAAA
TCCCAAATCA ATTGGCAAGA TTTCGAACCC TATCCTTTTA TCCTTTATAA CGAGGATTTC
TCCCTCGCTA AGCTGATAAA CCGCCTCAGT CGTAAGGCTG GTGTGCAATT GAATATTGCC
TTTCGTAGCG GTCAGTGGGA TTTTCTAGCG GCTATGGTGG AGGCCGATAT GGGCGTTGCC
ATTTTACCTG AGCCTATCTG TCATAAACTC ACTAGTAGCA AATTAATCTT CAAACCAATG
CAGCCCGCTA TGACATGGGA TCTCGCACTA ATTTGGCGCC AGAGTTTACC CTTAACACCC
GCTGCCAATG CGCTGCTGGA ATTGAGTAAA CAAAAGACCG AATCCTAG
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| Protein sequence | MNIPIKTLQC FLTLVETENF TRAAQKCFIT QPTLSKIIQR LEESLGETLL IRNNQKVELT
QAGQLFEHSA REILGQWHRL QEDMSNLSGL KSGRLRLGVC PMMSSLIIGL LTSYRKRYPG
IELQMYEYGG FGCEQALLNN SLDIAFTALP TTHETELVNQ PLTKYPLLAC LPEGHPLADK
SQINWQDFEP YPFILYNEDF SLAKLINRLS RKAGVQLNIA FRSGQWDFLA AMVEADMGVA
ILPEPICHKL TSSKLIFKPM QPAMTWDLAL IWRQSLPLTP AANALLELSK QKTES
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