Gene Sputcn32_3144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3144 
Symbol 
ID5078488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp3656410 
End bp3657081 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content46% 
IMG OID640500341 
ProductABC transporter related 
Protein accessionYP_001184655 
Protein GI146294231 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGAAG TCGCTAAACT CATTCAGATC AGTAAAAGTT TTCGCGATGG AGAACTGCGC 
CATGCCGTAC TGCAATCGGT TGACTTAGCG ATCCACAAAG GTGACACAGT TGCGCTCACA 
GGGCCTAGCG GAAGTGGAAA GAGCACTTTG CTAAATCTTA TTGCAGGCTT TGAAACACAA 
GATTCAGGTG AAATATTCCT TGAAAATAAA TCAACTAAAA ACTGGCAAGA TAGTCAATGG 
AGTCACTTTC GACGGCAATC ACTGGGGGTC GTATTTCAGC AATTTAACTT ACTGACACCA 
CTGAATGTAA AAGATAATAT CGCGTTTTCC CTCAACCTTA TCCAGCAATC ATGGTCGCCT 
TGGTGTGATT ATTTAGTGGA TAAACTGGAT CTTACACCAC TGCTACAACG GCAGATTGAA 
GCGCTATCCG GTGGACAACA ACAAAGAGTC GCCATTGCCC GTGCCTTAGC CCACAAACCC 
AGTTTGCTGC TTGCCGATGA ACCCACGGGT AACTTAGATG ACGTGGCGGG TAAGCAAGTG 
ATGTCACTAC TTTGTGAACT CGCAAGGGAA AGCCACACCA GCATTTTGAT GGTCACCCAT 
AGCGAGGAAT GTGCGGCCTT TATGCAAAAA CGCTGGCATT TATCCCATGG TGCCGTGGCA 
ATTTCAGGAT GA
 
Protein sequence
MTEVAKLIQI SKSFRDGELR HAVLQSVDLA IHKGDTVALT GPSGSGKSTL LNLIAGFETQ 
DSGEIFLENK STKNWQDSQW SHFRRQSLGV VFQQFNLLTP LNVKDNIAFS LNLIQQSWSP 
WCDYLVDKLD LTPLLQRQIE ALSGGQQQRV AIARALAHKP SLLLADEPTG NLDDVAGKQV 
MSLLCELARE SHTSILMVTH SEECAAFMQK RWHLSHGAVA ISG