| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3142 |
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| Symbol | |
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| ID | 5078486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3648862 |
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| End bp | 3654177 |
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| Gene Length | 5316 bp |
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| Protein Length | 1771 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640500339 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001184653 |
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| Protein GI | 146294229 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAGAA GTAAACTTCG TACCTTCCGC AGTAGAATTT TATCTCACAT CGCCTTGCCT
TTGATTTTAA TTATGACGGG TGTGTATGGC GTAAACTCTT GGTTTAAATA TCAAGCATTA
GAAAAAACGC TCTATGAAAA ATTAGAACAG CAGGCTAGCC ATTCGGCTTC TCGGTTACAA
CTTATCCTCG AACATGCCCA AGCGAACACC CAAGGACTGG CAGATTTTAT CGGTTTTTTA
TCTAATAAAG AGGGATTTAA TGATATCGAT AACGTCAAAC AGGTATTGAT GAATCGTTTG
GAGCGAAACC CAGACTTTTT TGGTACTGCT GTTGCGTTTA AACCCGATGT ATTTCCTAAT
CGAAAACTCT TTTCTCCTTA TGTATACCGC GCTGGCGAGG CGTTGCATTA CCTCGATATT
GGTGCCGAGG GCTATGATTA CACCGATGGT TCTTGGGACT GGTGGACGAA TGCCATTAAT
CAAGCCAATG GCTATTGGTC TAAGGCATAT TTTGATGAAG GTGCTGGCAA TGTCCTTATG
GTCACTTACT CCGCCCCTTT TGGCGTTTTA GATCATTATT TTGGTGTGGC TACTGTCGAT
CTCGCCCTCG ATAGATTACC TAGCCAACTA GGTGTTGCGT CGAATCGCTT AGTTATATTA
GACGATCAGG AACGACTCAT TTTTCATGCC GATAGAGACA AAATACTGTC CACAACCTCG
GCGCAGTGGC TCGATAAGAG CATGAAACAC AATGGGGACT TTTGGTTACT CCAAGAGAAA
AATCTCGATG GACAGGCAAG GTTTGTTGAT GTGCAGGGGA TTAGCTATCT TGCCAGTGTT
GCAACTGTGC CTAAATTGAA ATGGCGCGTC GTCGTTATGG TGCCAGAACA GGAGTTATTT
ACGGCTTTAC TCGATGATAT TGCCTCCATT GTGCTGGATT TAAGTTTGTT AACCTTGCTG
TTATTGCTGA CCTGCTATTT AACTGCAAAA CGCCTGACCC GACCATTAGA GTTACTGGAA
TCAGGCATTC TCGCCTTTGG TCAAGGTAAA GCACAGCAAC TTGTTATTCC TAAAGGTGCG
GTGAGCGAAA TTGTGACCTT AAGCCAGACC TTTAATCAAA TGGCCGAGCT ATTAGCTGAG
CGTGAACAGG CCATTCTCGA CTCCCGTGGT AACCGCTTTG CTCGCTTAAT TGACGGTATG
AGTGATAAAT CCTTTTACTG TTCACTCGAA CCTTCAGGGC AGTTGGCCCA AGTGAGTGAT
GGTGTGACGA AAGTACTTGG CATTGCACCT GAGTTATTAA AGCGAAAATA TCAACGGCTT
TTCTCGGTAA ATCCACTGAA TGAAAAAAAT TGGCAATACA CAGATTTGGC CTTAAAAGGC
CAAAATGTGC CTTCGCACCA AGTTGAAATG ATTGATGCTC AAGGCCATTT AAGGCGCCTC
GATGTCTTTA TGCAGCCCTT AGTGTCAGAG ACGGGCGAAT TAATGTCGGT AGAAATGCTT
TTTACCGATG TGACAGAGCA GTTTTCAGCG GCAGCTTGGT CAAATGCCGT GCTTGAAGCC
GCACCAGAAG CCATGCTGAT TGTTGATGAA AAAGGTGAAA TCATCTTTAG CAATAGTCGT
TGCCAACAAC TGTTTGGTTA TCATGCTGAG GCCATGTTAG GGCTGCAAGT TGAAGCTCTA
TTGCCCCAAG CACTAGGGAG TGAACATGTG CGTTATCGGC AACAGTTTTT ACGTGATGGC
CGCGATAGAA GCATGGCAAA TGCGCGTCAT GTCCGTGCTG TAAAGGCCGA TGGTAACGAG
TTTATTGCTG AAATTGCCTT AAGTATTCTC CCCGCCGATG TGGATGGCAG TAGACAGGTC
GCTGCTTCCA TTCGCGATAT GACTCAGAAA TTAGCCATCG AACAAAAAAT CCGTGACAGT
GAGCTACGTT TTCGCGGTTT GGTGGCGAAT ATTCCCGGTG CTGTTTACCG TACCCGTATC
GGCGAGGTAT GGGTGATGGA ATATATCAGT GACAATATCG CCGATATTAC GGGTTATGCG
GCAAGTCAGT TTATCGAAAA CCGCCAACGT AACTTCTCAT CTTTGATTCT GGAAGAAGAT
CGTCCTCTGT GTCATCAGCA TATTGATAAG GCATTGGCAC AGCAAGAAAC CTTTGAGGTG
GAATATCGTA TTCGCCACCG CGATGGCAGC ATCCGTTGGG TGCATGAAAA GGGTAAAGCG
AGCTATAACG AAGAGGGCTT CCCACTTTGG TTTGATGGCA GTATTGATGA TATTACCGAG
AGCAAACTCG TGTCTGTCGA GCTTGAAGCC TCACGTCAGC AGCTGACCAA TATTACTGAA
TCGATTCCTT GTACTGTGTA CCAGTTGCGT TGGCGTTCTC CCTCTGATCG CGCATTTACC
TTTCTTTCTG GTGCCGCACT GCCGATGCTA GGGTTGCAAC GCGATAATTT AATGAATGAT
TTTAATATTA TTGCAGAGCG TATTTTTGAT GAGGAAAGGC CTGAGGTTGT TCGTGCCTTA
GCGGGTAAGA GTGACGATAA GTTGCAGTGG ATCCGCGAGT TTCGTTATCG ACATCCTAAC
GGCAGTATAC GCTGGATGGA GGCTGGTGCG AGTGGTCACG TAGAGAGTGA TGATGTGATC
ATTTGGAATG GTTACGTTAT GGATATCACT CAGCGTAAAA CTATGGAGCA AGAACTCGCC
TTAAGTGAAG CGCACTTTAG GGCACTTTTT GATGGTGCAA CCATAGGTAT TATCAATATC
GATGCTAAGG GCTTGATTCT GGATTGTAAT GACCAATTCT GTGAAGACAT AGGACGAGCC
CGTGAGGAAT TACGTAATAT TCCCATATTT GATGTCCTTA GCCCACAGGA TAGAGAGATT
GCTAAAGCAC AATTTAAAGA TCTTGCTGAT GGTAAAGTCG ATCACTATCG TGGAGAACGT
AGTTTTATTC GCCCCTCCGG TGAGCCAATG TGGATGACGG TTAATGTTTC CGCACTTTTT
GACTGTCATC ACCAATTTGA ATCTGCAGTT GTCAGCATGG TGGATATGAC CGAGCTTAAA
CTGTTGTCAG ATGAACTGCT TATCGCTAAA GAAGAAGCCG ATGCAGCCAG TAAGGCAAAG
GGGGACTTTT TGGCCAATAT GTCCCATGAA ATACGCACGC CAATGAATGC CATTATTGGT
ATGTCACAGC TGTGTTTACA GACCGCGCTC GATAAAAAAC AGAAAAACTA TGTGGAGAAA
ATTGAGCGAG CCTCACAATC ATTACTCTCA ATTATCAATG ACATCCTCGA TTTTTCTAAG
ATCGAAGCCG GTAAGCTGGA TATTGACGCC GTTCCTTTTC AACTCGATAC CATGCTCGAA
GATCTCAGTG ATATGTTCTC GGAGAAGGTG GTTCACAAAC AACTTGAGTT ATTGTTTGCA
GTTGCGCCCA ATGTGCCACG GCATTTGTTT GGCGATTCGC TACGCTTAGG GCAAGTGCTG
ATCAACCTGA TGAACAATGC GATTAAGTTT ACTGAAAGAG GGGAAGTATT ACTTTCTATC
AACTTGGTCG AGCAACAGAA TGATGATGTG ACGCTGCGCT TTAGTGTACG CGATAGCGGC
ATAGGCTTAA CCGATGAACA GCAAGCCAAA CTGTTTAAAT CTTTCAGCCA AGCGGATACT
TCCACGACAC GTAAATACGG TGGTACAGGC CTAGGTTTAG CCATTTGTAA ACAGCTAGTG
GAGCTAATGG GAGGTAATAT TGGCGTTGAG AGTCAATTTG GGCATGGCAG TACTTTCTAT
TTCACGGTGA AACTGCAAAT TTCCAGTGGT CAAAAGTTGA CGGTAGGTCA AGAGCTCGAA
GGCATGTCGG TGTTAGTGGT CGATGATAAT GCGACGGCTA GAGACATTAT GCGTACGGCA
CTGGAGAGCA TGGGATTCAA TGTTGATACA GTGCGCACAG GCGAAGAGGC TGTTAGTCGA
TGTATACAGC ATGAGTATGC CGTAGCATTA ATTGATTGGA AGATGCCGAG TATGGATGGG
CTAGAAGCTG CACGGCAGAT CCAACAGCAG GCTAAAGCCG CACCGCGGAT CTTAATGGTG
TCTGCCCATG CGAACCATGA ATTTTTAACA CAAATAGAGC AACTTGGATT AGCGGGATAT
ATCAGCAAAC CTATCAGTGC CTCACGCTTG CTTGATGGCA TAATGAATGC CCTAGGTAGG
GCCGGAATCT TACCGGTGAG GCGGCATAAT GAAGCGTTAG ATCCCCAACT CTTACTGCCA
CTTAAAGGAA AGCGTGTCCT CTTAGTTGAA GATAATGAGA TGAATCTTGA AGTCGCCACA
GAGTTTTTGG AGCAAGTGGG TATTATTTTA TCCATTGCGA CGAATGGGCA AATTGCCTTA
GATAAACTGT CTCAGCAAAG TTATGACTTA GTGCTTATGG ATTGCCAAAT GCCAGTGATG
GACGGTTATC AAGCGACAAT GGCAATAAGG CAGCGGCCTG AGTTGGCACA TCTCCCCGTT
ATCGCTATGA CCGCAAATGC CATGGCTGGC GATAAAGAAA TGTGCTTAAG AGCAGGGATG
AATGGCCACA TCGCTAAACC TATCGAAGTC AATATTCTGT ATCAAACCTT ATTAAAATAT
CTTGGAGATG ATAAGTCGCA ATCGACCTTA TTAGAAAACG CACAAGTTAA TGATATTAAA
AATAAACCTA TCAATACTGA TCCAGCAACT ATGCTTAAAT GGCCAGAGCA TCCCGAGTTA
GATATTGATA GGGGATTGCA ACTTGTCCAG CATTCTGCAC GTTTGTATCA ACGGATTTTT
GATCGATTTG TAAGCAGTCA GCGTAATGTT GTGGAGATGC TTCGTAAGGC TGTTAGTGCA
AATAAACAGG AGGATGCCGT ACGTATTGCC CACACGCTCA AAGGGCTTGC TGGTAATTTA
AGTTCGAGCA AATTAGTTGA ACTTGCTCGT TTATTAGAAT TGCATTTGAG TGAAAATCAG
CCTTATCAGG ACGAGCTTGA GCAGATTGAA AAACTGGTTG CCTCTATTTG TGAAGCTATC
GAAAAAGTAA AGCCTGAATT AGAGGACATT TCTGAGATTG GGATAGAGCC ACTCTCCTCT
GAACAGTTAA TCATAGCGCT TAAACACTTA CGTCAGAGTT TAGAAGAGGC CGATGCTAAG
GCTGTGGAGC TGATTAATGC GTTAAAACCC CAAGTGAGCA CCAAGTTATG GCAACAATTA
AGCCCGGTAC TGGCGATGAT TAATCAATAT CAATTTGATG AAGCGGTGGA CTTGATTGAC
GAGGTTTTAG CAGAGTTAAA TTCGCATTCC CAATGA
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| Protein sequence | MDRSKLRTFR SRILSHIALP LILIMTGVYG VNSWFKYQAL EKTLYEKLEQ QASHSASRLQ
LILEHAQANT QGLADFIGFL SNKEGFNDID NVKQVLMNRL ERNPDFFGTA VAFKPDVFPN
RKLFSPYVYR AGEALHYLDI GAEGYDYTDG SWDWWTNAIN QANGYWSKAY FDEGAGNVLM
VTYSAPFGVL DHYFGVATVD LALDRLPSQL GVASNRLVIL DDQERLIFHA DRDKILSTTS
AQWLDKSMKH NGDFWLLQEK NLDGQARFVD VQGISYLASV ATVPKLKWRV VVMVPEQELF
TALLDDIASI VLDLSLLTLL LLLTCYLTAK RLTRPLELLE SGILAFGQGK AQQLVIPKGA
VSEIVTLSQT FNQMAELLAE REQAILDSRG NRFARLIDGM SDKSFYCSLE PSGQLAQVSD
GVTKVLGIAP ELLKRKYQRL FSVNPLNEKN WQYTDLALKG QNVPSHQVEM IDAQGHLRRL
DVFMQPLVSE TGELMSVEML FTDVTEQFSA AAWSNAVLEA APEAMLIVDE KGEIIFSNSR
CQQLFGYHAE AMLGLQVEAL LPQALGSEHV RYRQQFLRDG RDRSMANARH VRAVKADGNE
FIAEIALSIL PADVDGSRQV AASIRDMTQK LAIEQKIRDS ELRFRGLVAN IPGAVYRTRI
GEVWVMEYIS DNIADITGYA ASQFIENRQR NFSSLILEED RPLCHQHIDK ALAQQETFEV
EYRIRHRDGS IRWVHEKGKA SYNEEGFPLW FDGSIDDITE SKLVSVELEA SRQQLTNITE
SIPCTVYQLR WRSPSDRAFT FLSGAALPML GLQRDNLMND FNIIAERIFD EERPEVVRAL
AGKSDDKLQW IREFRYRHPN GSIRWMEAGA SGHVESDDVI IWNGYVMDIT QRKTMEQELA
LSEAHFRALF DGATIGIINI DAKGLILDCN DQFCEDIGRA REELRNIPIF DVLSPQDREI
AKAQFKDLAD GKVDHYRGER SFIRPSGEPM WMTVNVSALF DCHHQFESAV VSMVDMTELK
LLSDELLIAK EEADAASKAK GDFLANMSHE IRTPMNAIIG MSQLCLQTAL DKKQKNYVEK
IERASQSLLS IINDILDFSK IEAGKLDIDA VPFQLDTMLE DLSDMFSEKV VHKQLELLFA
VAPNVPRHLF GDSLRLGQVL INLMNNAIKF TERGEVLLSI NLVEQQNDDV TLRFSVRDSG
IGLTDEQQAK LFKSFSQADT STTRKYGGTG LGLAICKQLV ELMGGNIGVE SQFGHGSTFY
FTVKLQISSG QKLTVGQELE GMSVLVVDDN ATARDIMRTA LESMGFNVDT VRTGEEAVSR
CIQHEYAVAL IDWKMPSMDG LEAARQIQQQ AKAAPRILMV SAHANHEFLT QIEQLGLAGY
ISKPISASRL LDGIMNALGR AGILPVRRHN EALDPQLLLP LKGKRVLLVE DNEMNLEVAT
EFLEQVGIIL SIATNGQIAL DKLSQQSYDL VLMDCQMPVM DGYQATMAIR QRPELAHLPV
IAMTANAMAG DKEMCLRAGM NGHIAKPIEV NILYQTLLKY LGDDKSQSTL LENAQVNDIK
NKPINTDPAT MLKWPEHPEL DIDRGLQLVQ HSARLYQRIF DRFVSSQRNV VEMLRKAVSA
NKQEDAVRIA HTLKGLAGNL SSSKLVELAR LLELHLSENQ PYQDELEQIE KLVASICEAI
EKVKPELEDI SEIGIEPLSS EQLIIALKHL RQSLEEADAK AVELINALKP QVSTKLWQQL
SPVLAMINQY QFDEAVDLID EVLAELNSHS Q
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