| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3140 |
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| Symbol | |
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| ID | 5078484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 3646672 |
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| End bp | 3647628 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640500337 |
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| Product | glycine cleavage T protein (aminomethyl transferase) |
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| Protein accession | YP_001184651 |
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| Protein GI | 146294227 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0354] Predicted aminomethyltransferase related to GcvT |
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| TIGRFAM ID | [TIGR03317] folate-binding protein YgfZ |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTATTT CAGTTTCTAC ACCCCATTGG GATCTGGACG CTACCTTGCC TCCACTTATG
CTTGCCAACT TATCTCATAT GGGCCTAATC AAAGTCGTTG GAGAACAAGG CCGTAGTTTT
ATCCATGGCC AAGTGACCAC AGACATCAGC TCATTGGCCA CGGATCAATG GCGCTGGGGC
GCCCATTGCG ATCCTAAAGG TAAAATGCTG GCCAGTTTCA GAACCTTTGC CATCCAAGAG
GCACTCTTTA TGTTGATGCC AAAGGGTGCT ATCGAAGTCG ATTTACCCCA ACTACAAAAA
TATGCGGTAT TTAGCAAAGC TACCTTAAGC AATGCATCCG GTGAATGGAC TTTACTCGGC
GTTGCCGGCG AACAAGCCTG CCAATTTGTG AAACAGCATT TTGGTGATAT TCAGCAAGAA
CTCACACTCA TTGAAAATGG TGCGATTTTA AAAGACGCGG ATAGATTTAT TTTGGTTCTG
CAACCAGAAA CCGCAAACAC CCTCGTTGCT AAGCACACAG TATTTGATGC CACCGCTTGG
CAAGCATTAG AAATTGCAGC GGGTTATCCT AACCTTGCCG CCAGTCATGC CCACCAGTAC
GTACCACAAA TGTGTAACCT GCAAGCTGTT AATGGTATCA GCTTTAATAA AGGCTGCTAC
ATGGGACAAG AAACCGTCGC CCGCATGAAG TACCGCGGCG GAAATAAGCG CGCACTTTAC
ATTCTCCATG GCACAACCTC GTTAACGGTG GATCTGGAAA CTAGCCTTGA AATTGCGATG
GAAGACGGTT ATCGCAAAGG GGGGCAAATC ATTGAATTTG TGCAACGCGG TAATCAAGTA
TTGCTGACTG CCGTACTGGC TAACGATACC GAAAATGACG CTAAACTGCG TTTTGCTGAC
GATGAGCAAT CAAGCTTGAC AATTCAAGCC TTACCTTACT CACTAGATGA AGCATAA
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| Protein sequence | MTISVSTPHW DLDATLPPLM LANLSHMGLI KVVGEQGRSF IHGQVTTDIS SLATDQWRWG
AHCDPKGKML ASFRTFAIQE ALFMLMPKGA IEVDLPQLQK YAVFSKATLS NASGEWTLLG
VAGEQACQFV KQHFGDIQQE LTLIENGAIL KDADRFILVL QPETANTLVA KHTVFDATAW
QALEIAAGYP NLAASHAHQY VPQMCNLQAV NGISFNKGCY MGQETVARMK YRGGNKRALY
ILHGTTSLTV DLETSLEIAM EDGYRKGGQI IEFVQRGNQV LLTAVLANDT ENDAKLRFAD
DEQSSLTIQA LPYSLDEA
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