| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3132 |
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| Symbol | panB |
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| ID | 5078476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 3638622 |
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| End bp | 3639416 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640500329 |
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| Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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| Protein accession | YP_001184643 |
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| Protein GI | 146294219 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
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| TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00216722 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTAAAA TTACTAGCTC AACCCTGTTG AAATACAAAC AGGAAGGTAG AAAATTCACT
GCACTGACAG CCTATGATGC CAGTTTTGCT GGCGCGTTCG ATAGCGAAGG TGTAGATGTG
CTACTCGTCG GTGATTCTTT GGGAATGGTC CTGCAAGGCC ATGACGATAC TCTCCCAGTC
ACGACAGCAG AGATCGCTTA CCATACTCGC TGCGTACGCC GCGGGATAGA GCGAGCGTTA
CTGATTGCCG ATATGCCTTT TATGAGTTAC GCCACGCCAG AACAAGCTAT GATTAACGCC
ACCGAGCTGA TGCAGGCTGG CGCCAACATG GTCAAAGTTG AAGGCGGCCA TTGGTTACTC
GAAACCGTCA CTAAACTCAC CGAACGCGGT ATTCCTGTTT GTGCCCACTT AGGGTTAACG
CCTCAATCTG TTCACGTTTT TGGTGGTTTT AAAGTTCAGG GGCGCGATGC CGAAAATGCC
CAGCGAATTC TCGATGAGGC CAAAGCATTA GAAGCCGCAG GCGCCCAATT ACTCGTCGTA
GAATGTATTC CAGCACCATT AGCCACAGCG ATCACCCAAG CCCTAACCAT TCCAGTCATT
GGAATTGGTG CTGGAGCATC GACCGATGGT CAGATTTTAG TGATGCATGA TGTATTAGGT
ATTTCAAGTG GTTATATTCC ACGTTTTTCG AAAAACTACC TAAAACAAAC GGGTGAAATC
CGTTCTGCGG TGCGCGCTTA TATTGAAGAA GTTGCCGCTG GCACCTTCCC CAGTGCAGAG
CACACATTCA GCTAA
|
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| Protein sequence | MSKITSSTLL KYKQEGRKFT ALTAYDASFA GAFDSEGVDV LLVGDSLGMV LQGHDDTLPV
TTAEIAYHTR CVRRGIERAL LIADMPFMSY ATPEQAMINA TELMQAGANM VKVEGGHWLL
ETVTKLTERG IPVCAHLGLT PQSVHVFGGF KVQGRDAENA QRILDEAKAL EAAGAQLLVV
ECIPAPLATA ITQALTIPVI GIGAGASTDG QILVMHDVLG ISSGYIPRFS KNYLKQTGEI
RSAVRAYIEE VAAGTFPSAE HTFS
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