| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3108 |
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| Symbol | |
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| ID | 5079748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 3613703 |
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| End bp | 3615355 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640500306 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001184620 |
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| Protein GI | 146294196 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCAAA GTGTTGCCAC AAGAGACCTA TCTATGAGTT TTACCTCCCT GGGCTTATCG
GCCCCGATAC TTAAAGCCGT CGCCGAACAA GGTTACGACA CACCTTCGCC AATCCAAGCG
CAAGCTATTC CCGCTGTGCT CCAAGGCCAA GATGTGATGG CGGCAGCCCA AACTGGAACA
GGTAAAACAG CAGGCTTCAC CCTTCCTTTG TTAGAGTTGC TCAGTAAAGG TCAAAAAGCC
CAAGCGGGAC AAGTTCGCAC CTTAGTATTA ACACCCACAC GTGAACTTGC GGCACAGGTT
GCTGAAAGTG TCGAAACCTA CGGCAAATAC TTACCCTTAC GCTCTGCGGT CGTCTTTGGT
GGCGTCCCGA TCAATCCGCA AATCGCAAAA TTACGCCACG GTGTCGATGT ATTAGTCGCG
ACACCCGGTC GATTAATGGA TCTGTACAAT CAAAAAGCGG TGAAATTTAA TCAACTTGAA
ATACTCGTAT TAGATGAAGC CGATCGCATG CTCGATATGG GCTTTATCCG AGATATCCGA
AAAATTCTCG CCATATTACC TAAGCAACGC CAAAACCTGA TGTTCTCAGC CACCTTCTCC
GATGAAATTC GCGAGTTAGC TAAAGGCTTA GTGAACAATC CGGTAGAAAT TTCGGTGACA
CCGCGCAATG CCGCAGCCAC CACAGTCAAA CAGTGGGTTT GCCCTGTTGA TAAAGGCCAA
AAGGCGGCAC TACTCACCCA ACTTATTAAG CAACACGACT GGCAACAAGT ATTAGTGTTT
TCACGCACTA AACACGGTGC CAACCGTTTA GCTAAAAATC TGGAAGAAGC AGGTATTAAA
GCTGCGGCAA TTCACGGTAA TAAAAGTCAA ACTGCACGTA CTAAAGCTTT GGCCGATTTT
AAAAATGGTC AAGTGCGTGT ATTAGTCGCA ACCGATATTG CGGCCCGCGG CTTAGATATT
GACCAGCTGC CACAGGTCGT TAACTTCGAC TTACCCAACG TGCCTGAAGA TTATGTCCAT
CGTATTGGTC GCACTGGTCG TGCAGGCGCT TCGGGCCAAG CGGTATCATT GGTCAGCAGT
GAAGAAATCA AATTACTTAA TGATATTGAA CGCCTTATCA ACCGTATCCT CGACCGTGAG
GTCGTTGAAG GCTTTAATCC AGTACATCCA CTGCCTGAGT CACGCTTAAA TTCGAGCAGT
AAAAATAACA CAGTAAAAAC CATTCCAAGT CGTCGCAATC ACCGAAGTGC TGGTCAGGCT
GCACCGAGAG CAGGTTCAGG ACGTGATGGC TATAAAGCTG AGGACAAAAA AGAAGGTGCG
CAGCGTCAAC AACATACACC ATCGCCCAAA AGTAACGAGC ATAAAGATGG TCAACGCAGC
GGTGATGTCG CTCGTGGTCA CAAGCCAAAC GACAAGAATC CCAGACACAG CGGTGAAGTC
AGTAGCGCTC CTCGCGGCGA TGCTAAACCT CGTCCACCAC GTTCAAACGA CGGTCGTGCG
AATAGCACTG GCACCAATCG CCCAAGTGAA GGCCGTTCAG GCTCTGGCGA AAATCGTAGT
CCATCAAGTG ACAATCCTTA CGCCAATGGC CCAAAGAAAA ACACCCGTCG CCCAAATAAC
GGTGCAAGTC GCCCAAGAAA CACCCAAGAT TAG
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| Protein sequence | MQQSVATRDL SMSFTSLGLS APILKAVAEQ GYDTPSPIQA QAIPAVLQGQ DVMAAAQTGT
GKTAGFTLPL LELLSKGQKA QAGQVRTLVL TPTRELAAQV AESVETYGKY LPLRSAVVFG
GVPINPQIAK LRHGVDVLVA TPGRLMDLYN QKAVKFNQLE ILVLDEADRM LDMGFIRDIR
KILAILPKQR QNLMFSATFS DEIRELAKGL VNNPVEISVT PRNAAATTVK QWVCPVDKGQ
KAALLTQLIK QHDWQQVLVF SRTKHGANRL AKNLEEAGIK AAAIHGNKSQ TARTKALADF
KNGQVRVLVA TDIAARGLDI DQLPQVVNFD LPNVPEDYVH RIGRTGRAGA SGQAVSLVSS
EEIKLLNDIE RLINRILDRE VVEGFNPVHP LPESRLNSSS KNNTVKTIPS RRNHRSAGQA
APRAGSGRDG YKAEDKKEGA QRQQHTPSPK SNEHKDGQRS GDVARGHKPN DKNPRHSGEV
SSAPRGDAKP RPPRSNDGRA NSTGTNRPSE GRSGSGENRS PSSDNPYANG PKKNTRRPNN
GASRPRNTQD
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