Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3099 |
Symbol | |
ID | 5079739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 3600757 |
End bp | 3603951 |
Gene Length | 3195 bp |
Protein Length | 1064 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640500297 |
Product | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
Protein accession | YP_001184611 |
Protein GI | 146294187 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0987306 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGCGA TAACTATGTT CAAAGCGAGT GAAGTGCTGG CAGGCCGCTA CGATTCTGCC AATCTCGACG AACTGTTCAA AGCTATCAGC GACAACTACA TTGTCGATGA AGAACAATAC TTGTCAGAGC TAATCAAACT AGTGCCCTCC AGTGATGAAG CCATAGAGCG TGTCACTCGT CGAGCCCATG AACTGGTCAA CAAGGTTCGT CAATTTGAGA AAAAAGGCTT AATGGTTGGC ATTGATGCCT TCCTGCAGCA ATACAGCCTA GAAACACAGG AAGGCATTAT CCTGATGTGC TTAGCCGAAG CGCTATTGCG TATTCCCGAT GCCGCCACCG CAGATGCGCT AATTGAAGAT AAGCTTTCAG GCGCTAAGTG GGATGAGCAT ATGAGTAAAA GTGACTCAGT GCTGGTTAAC GCATCGACTT GGGGCCTAAT GCTCACGGGG AAAATTGTTA GTTTAGATAA AAAACTCGAT GGCACCCCAA GCAGCCTACT CAGCCGTTTA GTTAATCGCT TGGGTGAACC CGTGATCCGT CAGGCCATGA TGGCAGCGAT GAAGATCATG GGTAAACAGT TTGTCCTTGG CCGCACGATG AAAGAAGCCC TGAAAAACAG CGAAGACAAA CGTAAGTTAG GTTATACCCA TTCCTACGAT ATGCTGGGCG AAGCGGCGTT AACTCGCAAA GATGCCGATA AATACTATAC CGATTACGCT AATGCGATAA CCGAACTCGG TGCTCAAAGC TATAACGAAA ATGAATCACC GCGCCCAACT ATCTCCATCA AACTATCGGC ACTGCACCCA CGTTACGAAG TGGCCAATGA AGATCGTGTT TTAACTGAGC TGTACGATAC AGTGATTCGC CTGATTAAGC TGGCACGTGG CTTAAATATC GGTATATCTA TCGATGCTGA AGAAGTCGAT CGCCTCGAGT TATCACTGAA ACTGTTCCAA AAACTGTTTA ATTCTGAAGC GACAAAAGGC TGGGGATTAC TGGGTATTGT GGTTCAAGCT TACTCTAAGC GTGCCCTGCC CGTGCTAGTT TGGTTAACGC GTCTGGCGAA AGAGCAAGGG GATGAAATCC CCGTCCGCTT AGTAAAAGGC GCCTATTGGG ATAGCGAACT AAAATGGGCG CAGCAAGCGG GTGAAGCCGC TTACCCTCTC TACACTCGTA AAGCCGGTAC CGACGTATCT TACCTAGCCT GTGCACGTTA CCTGTTATCG GATGCGACTC GTGGTGCTAT CTACCCACAA TTTGCTAGCC ACAATGCGCA AACCGTGGCG GCAATTTCCG ATATGGCGGG CGATCGTAAC CATGAGTTCC AACGCTTACA CGGCATGGGA CAAGAACTGT ACGACACTAT TTTATCGGAA GCTGGCGCGA AAGCGGTACG TATCTATGCG CCTATCGGTG CCCATAAAGA TCTGCTGCCC TACTTAGTCC GTCGCCTGCT GGAAAACGGC GCGAATACTT CGTTCGTCCA CAAACTAGTC GATCCTAAAA CCCCCATCGA GTCATTAGTG GTACATCCGC TAACAACACT GACGGGCTAT AAAACCCTGG CTAACAACAG AATCGTTTTA CCTACCGACA TTTTCGGTAG TGATCGCAAA AATTCCAAGG GACTCAATAT GAACATCATT TCCGAATCTG AGCCATTCTT CGCAGCCTTA GACAAATTTA AAAATACCCA ATGGCAAGCG GGCCCTCTGG TTAACGGTAA AACCTTAACT GGTGAACATA AAACGGTTGT TAGCCCATAC GATACCACTC AAACCGTGGG TCAAGTGGCC TTTGCAGATA AAGCTGCTAT CGAACAAGCA CTGGCATCCG CCGAAGCGGC ATTTACCTCT TGGGCACGTA CGCCAGTAGA AACCCGTGCA TCTGCACTGC AAAAGTTAGC GGATTTATTA GAAGAAAACC GTGAAGAATT GATCGCGCTT TGTACCCGTG AAGCGGGCAA GAGCATTCAA GACGGTATCG ATGAAGTACG TGAAGCCGTT GATTTCTGTC GTTACTACGC AGTACAAGCC AAGAAGATGA TGGCAAAACC TGAACTGCTT CCAGGCCCAA CGGGTGAACT GAACGAACTG TTCCTCCAAG GTCGCGGTGT GTTCGTCTGT ATCAGCCCAT GGAACTTCCC ATTGGCTATC TTCTTAGGCC AAGTATCGGC AGCCCTCGCT GCGGGTAACA CTGTCGTAGC TAAACCTGCT GAACAGACTT CAATCATTGG TTACCGTGCA GTGCAGTTAG CACACCAAGC GGGTATTCCT GTCGAGGTGC TACAATTCCT ACCGGGTACT GGTGCGACTG TGGGTAGCGC AATTACGGCC GATGAACGTA TCGGTGGTGT ATGCTTTACC GGTTCAACTG GCACAGCAAA ACTGATTAAC CGCACACTCG CCAACCGCGA AGGCGCGATT ATTCCATTAA TCGCCGAAAC TGGCGGTCAA AATGCCATGG TGGTGGACTC AACCTCTCAA CCTGAGCAAG TAGTGAACGA TGTGGTTTCA TCGTCATTCA CCAGTGCGGG CCAACGCTGC TCGGCGCTGC GCGTACTCTT CCTCCAAGAA GATATCGCTG ATCGCGTGAT CGATGTGCTG CAAGGTGCGA TGGATGAATT AGTGATTGGC AACCCAAGTT CAGTGAAAAC CGACGTAGGC CCAGTGATTG ACGCCACCGC CAAAGCTAAC TTAGATGCCC ACATCGACCA TATCAAGCAA GTCGGTAAGC TTATCAAGCA AATACCACTG CCTGCGGGCA CTGAAAATGG TCACTTCGTG TCGCCCACTG CGGTTGAAAT CGATTCAATT AAAGTGCTAG AGAAAGAACA CTTTGGCCCA ATCCTGCATG TGATCCGTTA TAAAGCGGCA GATCTTGGCA AAGTGATCGA TGAAATCAAC AGCACAGGTT TTGGCTTAAC CTTAGGTATC CATAGCCGTA ACGAAGGCCA TGCCTTGGAA GTTGCCGACA AAGTGAACGT GGGTAACGTC TACATTAACC GTAACCAAAT CGGTGCTGTG GTGGGCGTAC AGCCTTTCGG TGGTCAAGGT CTGTCAGGCA CAGGCCCTAA AGCCGGTGGT CCACACTACT TAACCCGTTT TGTGACTGAA AAGACCCGCA CCAACAACAT CACCGCCATC GGTGGTAACG CCACGTTACT GTCACTGGGT GATAGTGAAG AATAA
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Protein sequence | MEAITMFKAS EVLAGRYDSA NLDELFKAIS DNYIVDEEQY LSELIKLVPS SDEAIERVTR RAHELVNKVR QFEKKGLMVG IDAFLQQYSL ETQEGIILMC LAEALLRIPD AATADALIED KLSGAKWDEH MSKSDSVLVN ASTWGLMLTG KIVSLDKKLD GTPSSLLSRL VNRLGEPVIR QAMMAAMKIM GKQFVLGRTM KEALKNSEDK RKLGYTHSYD MLGEAALTRK DADKYYTDYA NAITELGAQS YNENESPRPT ISIKLSALHP RYEVANEDRV LTELYDTVIR LIKLARGLNI GISIDAEEVD RLELSLKLFQ KLFNSEATKG WGLLGIVVQA YSKRALPVLV WLTRLAKEQG DEIPVRLVKG AYWDSELKWA QQAGEAAYPL YTRKAGTDVS YLACARYLLS DATRGAIYPQ FASHNAQTVA AISDMAGDRN HEFQRLHGMG QELYDTILSE AGAKAVRIYA PIGAHKDLLP YLVRRLLENG ANTSFVHKLV DPKTPIESLV VHPLTTLTGY KTLANNRIVL PTDIFGSDRK NSKGLNMNII SESEPFFAAL DKFKNTQWQA GPLVNGKTLT GEHKTVVSPY DTTQTVGQVA FADKAAIEQA LASAEAAFTS WARTPVETRA SALQKLADLL EENREELIAL CTREAGKSIQ DGIDEVREAV DFCRYYAVQA KKMMAKPELL PGPTGELNEL FLQGRGVFVC ISPWNFPLAI FLGQVSAALA AGNTVVAKPA EQTSIIGYRA VQLAHQAGIP VEVLQFLPGT GATVGSAITA DERIGGVCFT GSTGTAKLIN RTLANREGAI IPLIAETGGQ NAMVVDSTSQ PEQVVNDVVS SSFTSAGQRC SALRVLFLQE DIADRVIDVL QGAMDELVIG NPSSVKTDVG PVIDATAKAN LDAHIDHIKQ VGKLIKQIPL PAGTENGHFV SPTAVEIDSI KVLEKEHFGP ILHVIRYKAA DLGKVIDEIN STGFGLTLGI HSRNEGHALE VADKVNVGNV YINRNQIGAV VGVQPFGGQG LSGTGPKAGG PHYLTRFVTE KTRTNNITAI GGNATLLSLG DSEE
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