Gene Sputcn32_3099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3099 
Symbol 
ID5079739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp3600757 
End bp3603951 
Gene Length3195 bp 
Protein Length1064 aa 
Translation table11 
GC content49% 
IMG OID640500297 
Productbifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 
Protein accessionYP_001184611 
Protein GI146294187 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0506] Proline dehydrogenase
[COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase 
TIGRFAM ID[TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0987306 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGCGA TAACTATGTT CAAAGCGAGT GAAGTGCTGG CAGGCCGCTA CGATTCTGCC 
AATCTCGACG AACTGTTCAA AGCTATCAGC GACAACTACA TTGTCGATGA AGAACAATAC
TTGTCAGAGC TAATCAAACT AGTGCCCTCC AGTGATGAAG CCATAGAGCG TGTCACTCGT
CGAGCCCATG AACTGGTCAA CAAGGTTCGT CAATTTGAGA AAAAAGGCTT AATGGTTGGC
ATTGATGCCT TCCTGCAGCA ATACAGCCTA GAAACACAGG AAGGCATTAT CCTGATGTGC
TTAGCCGAAG CGCTATTGCG TATTCCCGAT GCCGCCACCG CAGATGCGCT AATTGAAGAT
AAGCTTTCAG GCGCTAAGTG GGATGAGCAT ATGAGTAAAA GTGACTCAGT GCTGGTTAAC
GCATCGACTT GGGGCCTAAT GCTCACGGGG AAAATTGTTA GTTTAGATAA AAAACTCGAT
GGCACCCCAA GCAGCCTACT CAGCCGTTTA GTTAATCGCT TGGGTGAACC CGTGATCCGT
CAGGCCATGA TGGCAGCGAT GAAGATCATG GGTAAACAGT TTGTCCTTGG CCGCACGATG
AAAGAAGCCC TGAAAAACAG CGAAGACAAA CGTAAGTTAG GTTATACCCA TTCCTACGAT
ATGCTGGGCG AAGCGGCGTT AACTCGCAAA GATGCCGATA AATACTATAC CGATTACGCT
AATGCGATAA CCGAACTCGG TGCTCAAAGC TATAACGAAA ATGAATCACC GCGCCCAACT
ATCTCCATCA AACTATCGGC ACTGCACCCA CGTTACGAAG TGGCCAATGA AGATCGTGTT
TTAACTGAGC TGTACGATAC AGTGATTCGC CTGATTAAGC TGGCACGTGG CTTAAATATC
GGTATATCTA TCGATGCTGA AGAAGTCGAT CGCCTCGAGT TATCACTGAA ACTGTTCCAA
AAACTGTTTA ATTCTGAAGC GACAAAAGGC TGGGGATTAC TGGGTATTGT GGTTCAAGCT
TACTCTAAGC GTGCCCTGCC CGTGCTAGTT TGGTTAACGC GTCTGGCGAA AGAGCAAGGG
GATGAAATCC CCGTCCGCTT AGTAAAAGGC GCCTATTGGG ATAGCGAACT AAAATGGGCG
CAGCAAGCGG GTGAAGCCGC TTACCCTCTC TACACTCGTA AAGCCGGTAC CGACGTATCT
TACCTAGCCT GTGCACGTTA CCTGTTATCG GATGCGACTC GTGGTGCTAT CTACCCACAA
TTTGCTAGCC ACAATGCGCA AACCGTGGCG GCAATTTCCG ATATGGCGGG CGATCGTAAC
CATGAGTTCC AACGCTTACA CGGCATGGGA CAAGAACTGT ACGACACTAT TTTATCGGAA
GCTGGCGCGA AAGCGGTACG TATCTATGCG CCTATCGGTG CCCATAAAGA TCTGCTGCCC
TACTTAGTCC GTCGCCTGCT GGAAAACGGC GCGAATACTT CGTTCGTCCA CAAACTAGTC
GATCCTAAAA CCCCCATCGA GTCATTAGTG GTACATCCGC TAACAACACT GACGGGCTAT
AAAACCCTGG CTAACAACAG AATCGTTTTA CCTACCGACA TTTTCGGTAG TGATCGCAAA
AATTCCAAGG GACTCAATAT GAACATCATT TCCGAATCTG AGCCATTCTT CGCAGCCTTA
GACAAATTTA AAAATACCCA ATGGCAAGCG GGCCCTCTGG TTAACGGTAA AACCTTAACT
GGTGAACATA AAACGGTTGT TAGCCCATAC GATACCACTC AAACCGTGGG TCAAGTGGCC
TTTGCAGATA AAGCTGCTAT CGAACAAGCA CTGGCATCCG CCGAAGCGGC ATTTACCTCT
TGGGCACGTA CGCCAGTAGA AACCCGTGCA TCTGCACTGC AAAAGTTAGC GGATTTATTA
GAAGAAAACC GTGAAGAATT GATCGCGCTT TGTACCCGTG AAGCGGGCAA GAGCATTCAA
GACGGTATCG ATGAAGTACG TGAAGCCGTT GATTTCTGTC GTTACTACGC AGTACAAGCC
AAGAAGATGA TGGCAAAACC TGAACTGCTT CCAGGCCCAA CGGGTGAACT GAACGAACTG
TTCCTCCAAG GTCGCGGTGT GTTCGTCTGT ATCAGCCCAT GGAACTTCCC ATTGGCTATC
TTCTTAGGCC AAGTATCGGC AGCCCTCGCT GCGGGTAACA CTGTCGTAGC TAAACCTGCT
GAACAGACTT CAATCATTGG TTACCGTGCA GTGCAGTTAG CACACCAAGC GGGTATTCCT
GTCGAGGTGC TACAATTCCT ACCGGGTACT GGTGCGACTG TGGGTAGCGC AATTACGGCC
GATGAACGTA TCGGTGGTGT ATGCTTTACC GGTTCAACTG GCACAGCAAA ACTGATTAAC
CGCACACTCG CCAACCGCGA AGGCGCGATT ATTCCATTAA TCGCCGAAAC TGGCGGTCAA
AATGCCATGG TGGTGGACTC AACCTCTCAA CCTGAGCAAG TAGTGAACGA TGTGGTTTCA
TCGTCATTCA CCAGTGCGGG CCAACGCTGC TCGGCGCTGC GCGTACTCTT CCTCCAAGAA
GATATCGCTG ATCGCGTGAT CGATGTGCTG CAAGGTGCGA TGGATGAATT AGTGATTGGC
AACCCAAGTT CAGTGAAAAC CGACGTAGGC CCAGTGATTG ACGCCACCGC CAAAGCTAAC
TTAGATGCCC ACATCGACCA TATCAAGCAA GTCGGTAAGC TTATCAAGCA AATACCACTG
CCTGCGGGCA CTGAAAATGG TCACTTCGTG TCGCCCACTG CGGTTGAAAT CGATTCAATT
AAAGTGCTAG AGAAAGAACA CTTTGGCCCA ATCCTGCATG TGATCCGTTA TAAAGCGGCA
GATCTTGGCA AAGTGATCGA TGAAATCAAC AGCACAGGTT TTGGCTTAAC CTTAGGTATC
CATAGCCGTA ACGAAGGCCA TGCCTTGGAA GTTGCCGACA AAGTGAACGT GGGTAACGTC
TACATTAACC GTAACCAAAT CGGTGCTGTG GTGGGCGTAC AGCCTTTCGG TGGTCAAGGT
CTGTCAGGCA CAGGCCCTAA AGCCGGTGGT CCACACTACT TAACCCGTTT TGTGACTGAA
AAGACCCGCA CCAACAACAT CACCGCCATC GGTGGTAACG CCACGTTACT GTCACTGGGT
GATAGTGAAG AATAA
 
Protein sequence
MEAITMFKAS EVLAGRYDSA NLDELFKAIS DNYIVDEEQY LSELIKLVPS SDEAIERVTR 
RAHELVNKVR QFEKKGLMVG IDAFLQQYSL ETQEGIILMC LAEALLRIPD AATADALIED
KLSGAKWDEH MSKSDSVLVN ASTWGLMLTG KIVSLDKKLD GTPSSLLSRL VNRLGEPVIR
QAMMAAMKIM GKQFVLGRTM KEALKNSEDK RKLGYTHSYD MLGEAALTRK DADKYYTDYA
NAITELGAQS YNENESPRPT ISIKLSALHP RYEVANEDRV LTELYDTVIR LIKLARGLNI
GISIDAEEVD RLELSLKLFQ KLFNSEATKG WGLLGIVVQA YSKRALPVLV WLTRLAKEQG
DEIPVRLVKG AYWDSELKWA QQAGEAAYPL YTRKAGTDVS YLACARYLLS DATRGAIYPQ
FASHNAQTVA AISDMAGDRN HEFQRLHGMG QELYDTILSE AGAKAVRIYA PIGAHKDLLP
YLVRRLLENG ANTSFVHKLV DPKTPIESLV VHPLTTLTGY KTLANNRIVL PTDIFGSDRK
NSKGLNMNII SESEPFFAAL DKFKNTQWQA GPLVNGKTLT GEHKTVVSPY DTTQTVGQVA
FADKAAIEQA LASAEAAFTS WARTPVETRA SALQKLADLL EENREELIAL CTREAGKSIQ
DGIDEVREAV DFCRYYAVQA KKMMAKPELL PGPTGELNEL FLQGRGVFVC ISPWNFPLAI
FLGQVSAALA AGNTVVAKPA EQTSIIGYRA VQLAHQAGIP VEVLQFLPGT GATVGSAITA
DERIGGVCFT GSTGTAKLIN RTLANREGAI IPLIAETGGQ NAMVVDSTSQ PEQVVNDVVS
SSFTSAGQRC SALRVLFLQE DIADRVIDVL QGAMDELVIG NPSSVKTDVG PVIDATAKAN
LDAHIDHIKQ VGKLIKQIPL PAGTENGHFV SPTAVEIDSI KVLEKEHFGP ILHVIRYKAA
DLGKVIDEIN STGFGLTLGI HSRNEGHALE VADKVNVGNV YINRNQIGAV VGVQPFGGQG
LSGTGPKAGG PHYLTRFVTE KTRTNNITAI GGNATLLSLG DSEE