| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3085 |
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| Symbol | |
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| ID | 5079725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3584766 |
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| End bp | 3585737 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640500283 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001184597 |
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| Protein GI | 146294173 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2203] FOG: GAF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTAC CTCCCATCCC AGAAAATGAG CTGCAACGTT TAGCCACGTT GCGAGCTCTC
AATGTGTTAG ATACCGATGC AGAGGAGCGC TTCGATCGTA TCACTCGCCT GACTCGGCGA
ATTTTTTCGT TGCCAATTTG TGTCATTACC CTTGTAGATG CTCAGCGCCA GTGGTTTAAA
TCTCGCCAAG GACTTGAAAT AACTGAAACA TCACGGGATA TTTCCCTTTG TGCCCACGCA
ATAAACTATG AGGGTATTTT TATTATTAAC GATACTCTTC TCGATCCGCG GTTTTGTGAT
AATCCTTTTG TGGCACAAGA ACCCTTTATT CGTTTTTATG CAGGTTACCC ACTCACGATA
AATCATCATT ACCGAGTAGG AACACTATGT GTAAATGACA CTGAACCTCG GGAGTTTAGC
CAAGAAGATA TTGAAACCTT GACAGATCTC GGCCAAATGG TTGAGGCCGA GTTATTATCT
ATCGCGCAGA ATACCTTAGA TCCTTTAACG GGCATTTCAA ATCGTCGAGG ATTTGAGTTA
TTAGCACATC AGGCCATAGC GAGTTGTCGA CGCACTGAAT CGGAGGCGGC TTTAGTGTTC
TTCGATCTCG ATTTTTTTAA AGAAGTGAAT GATAGCTTTG GTCATCGTAA GGGCGATCAG
GTGTTATATG ATTTTGCCCA TATCTTAATG ACTGCTTTTA GGGAGTCGGA TGTGATCGCA
AGGCTTGGCG GCGATGAGTT TGTGGTGCTG TTAAGTTTTG TGCATAGAGA TACAGTTAAT
CGGGTCATCG AGCGCTTTAC GCAGTTACTT GAGCAATATA ATCAACAGCA TCCTAAGCAA
CATCGATTGG CGACCAGCAT AGGTATCGCC CATTGGACGC CGGATTCAGA TATGGGCTTA
GAGGATCTGT TAGATTCCGC CGATAAAGCC ATGTATCAGA ATAAAGCCGC ACATCACAGT
GATGCATCTT AA
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| Protein sequence | MELPPIPENE LQRLATLRAL NVLDTDAEER FDRITRLTRR IFSLPICVIT LVDAQRQWFK
SRQGLEITET SRDISLCAHA INYEGIFIIN DTLLDPRFCD NPFVAQEPFI RFYAGYPLTI
NHHYRVGTLC VNDTEPREFS QEDIETLTDL GQMVEAELLS IAQNTLDPLT GISNRRGFEL
LAHQAIASCR RTESEAALVF FDLDFFKEVN DSFGHRKGDQ VLYDFAHILM TAFRESDVIA
RLGGDEFVVL LSFVHRDTVN RVIERFTQLL EQYNQQHPKQ HRLATSIGIA HWTPDSDMGL
EDLLDSADKA MYQNKAAHHS DAS
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