| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3083 |
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| Symbol | |
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| ID | 5079723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3582590 |
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| End bp | 3583660 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640500281 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001184595 |
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| Protein GI | 146294171 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGGTG ATTTTGAACC TAATTGGTTA TATTGGAAAA TAAATTGTTT ACCACTTAGG
TATAGAACAT TATCTATGGA AAAGCATTCG TCATTGACCC CATTTAAATT GCGGCACTTA
AGTTTTCGTT TATTGCAGGT CTATGTGCAG GTTGTTCGGC TTGGCAATAT TTCCGCAGCA
GCAAGGGTTT TACATTTAAC TCAGCCGACA GTGTCATTGC AACTTAAGAA ACTGGCCGAT
GTGTTGGGCG AGCCATTACT GGAGAGCCGT GATGGCCGCA TGTTGCCTAC TTTGATAGGT
AATGAACTTT ATCGCGCCGC CTGCGATACC TTAAGTCGTT TTGAGGATGT TGAAGCCTTT
ATGCAGCAGG CTAAAGGTGG CAGCGTTGGT CATATCAATA TTGGCATAGT CACCACTGCA
AAATACGTAT TACCACGGAT TTTAGGTGCA TTTTATCGGC AATTTCCACA GGTTAAAGTG
ACCTTAAATA TTGGTAATCG TGCCCATGTG TTAGGCCGAT TTGAACGCCA AGAAGATGAT
TTATATCTGT TTAGCCATCC ACCAAGTGGT GATAATGTGT TATCCGCGCG CATCATTAAA
AACCCACTGC AATTGATTGT GCCTAAAGAT CACTGGGCGG TGGGCCGCGA GCAAGTGAAT
TTTAATGAGC TTAAACATGA GCGTTTTATC GTGCGCGAAC CAGGCTCAGC CACGCGCTTG
ATGTTTGAGT CTTGGTGTAG TGCTCAAGGC ATAACCCTAA GCGATACGAT GCAAATTGAG
AGCAATGAAG CCATCCGTTT GAGCGTTGCG TCGGGTTTAG GATTATCCGT CATATCAGCA
CACACACTGC AAGAAGGGCG TGAAAAACCA GCGGTTTTGC CTGTTATTGG TTTTCCTCTT
GAAAGTAATT GGTATCTGGT TGGTCGTAAA GATCGCCGCT TACCCTATGC GGCCATGCAG
TTAGTGGATT TTATGGCAGC GCACTTGGCC GAATGTATTG AACCAGAGTG GGTTGCTACG
GATATCCAGC AGCTTAGCAT GCATTTTAAT CCTGCAAGTC TATCTAGGTA G
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| Protein sequence | MAGDFEPNWL YWKINCLPLR YRTLSMEKHS SLTPFKLRHL SFRLLQVYVQ VVRLGNISAA
ARVLHLTQPT VSLQLKKLAD VLGEPLLESR DGRMLPTLIG NELYRAACDT LSRFEDVEAF
MQQAKGGSVG HINIGIVTTA KYVLPRILGA FYRQFPQVKV TLNIGNRAHV LGRFERQEDD
LYLFSHPPSG DNVLSARIIK NPLQLIVPKD HWAVGREQVN FNELKHERFI VREPGSATRL
MFESWCSAQG ITLSDTMQIE SNEAIRLSVA SGLGLSVISA HTLQEGREKP AVLPVIGFPL
ESNWYLVGRK DRRLPYAAMQ LVDFMAAHLA ECIEPEWVAT DIQQLSMHFN PASLSR
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