| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3051 |
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| Symbol | |
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| ID | 5079793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 3535188 |
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| End bp | 3539462 |
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| Gene Length | 4275 bp |
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| Protein Length | 1424 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640500249 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_001184563 |
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| Protein GI | 146294139 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases
[COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGAAC TTCAAATTGA TGACCAAGTG CTGTTGGTTA ACCCAAACAA CACACTACTG
CAAGCAGCAC ATAATGCAGG GATAACCATC CCCAGCCTAT GCGATCAAAA CGCGGCCTCA
CAGCAATTAG TTACAGATAA ACACAATCAA AAACATGATG ATAAACAATC CTGTAACTTA
TGCGTGGTTC AAATTGAAAA TGCCGATGCA AGCCTTCGTT GCGTACGGGC TTGTGAAACA
CCCGTTGAGA TGGGAATGCG GGTAATCACT CAATCAGCCT ACCTTAGTAA AAAGCGTAAG
CAAGCACTCA ACAATATCCT AAGCGACCAC TTTGCCGATT GTGAGGCACC GTGCCAGCAG
GCCTGCCCAG CGGGTGTCGA TGTGCAGAGC TATTTATATC ACATTGCCCA AGGTAACCAT
ACGCAAGCCA TTAAAGTTAT TAAACAAACC TTGCCATTAC CCTTATCTAT TGGCCGTGTC
TGCCCAGCAT TCTGCGAGGC CGAATGTCGG CGAGGAAGTG TCGATGAACC TATCGCCATT
CGCCAATTAA AACGTCACGC TGCCGATTTG GATTTAGCAG AAGGTGAAAA TGGTGGTATG
AGTTACGTCC CCGAACGCCA AGCTGAAACG GGTAAAAGGG TCGCCATTAT CGGAGCGGGT
CCTGCGGGAT TAAGTGCTGG ATACTATTTA TCAAATCAAG GGCATAGCGT TGAGATATTT
GAAGCAATGC CCCAAGCGGG CGGCTGGCTA CGTTACGGTA TTCCTGAATA CCGTTTACCC
AAAGCGATAT TAGACAAAGA AATAGACTTA CTTTGCCGTA ACGGATTAAT GATACACACT
CAAACCCGCC TAGGGCATGA GGTACATCTA ACCCAATTAG CTAAAGATTT TGATGCCATC
TGCCTTGCTA TTGGCGCCCA AAAAGCCGTG CCGATGGATT ATCCCGGTAG CACGCTTAAG
GGATGTTATT TAGGCGTGGA TTATTTAAAA GACCATTGCC TCGAAAAATC GTTACCACTA
GGCAAAAAAG TAGCCGTCAT TGGTGGGGGA AATACCGCTA TCGATTGCGC TCGCACTGCA
GTACGTGAAG GCTGCGATGT CACTTTAATC TATCGTCGTA CCCGTGCTGA AATGCCTGCA
GAAGCCTATG AAGTCCATGA AGCTGAAGTT GAAGGGGTCA AATTTCACTT CTTAACGAAT
CCGATTGAAA ACCATAGTGA TGCAGATGGC CATGTCTGCG CGGTCACCTT TGCTAAAATG
GCACTTGGTG AAGCCGATGC TTCAGGCAGG CGAGCACCGA TTAATACGGG GGAAACCTTT
ACCCAAGACT TTGATACTGT GATAGCCGCG GTATCACAAA CCCCAGATAT GAGTTTTCTG
CAGGATCCTG CGAGTCATTT AAGCCAAGGA GAAATTGCTC TTAGCCGTTG GAATACCTTT
ATCGGCTGTG AACACACTAT GTCCGCGGGT ATTGAAAAAC TGTTTGTGAT TGGCGATTCT
CGCCGAGGCC CAGCCACCGC TGTTGCCGCC ATTGGTGATG GACACAAAGC GGCACAAGCC
ATTGATAAAA TGTTGAAACA AGGGCTAAGC TGCGAACTGT ATAGCGGTGA ATTTAATTCA
TCTAAAGCGG TTAGTCACAA TAGTAAACAA GATCAAATAG CACAGGATCT TTATCCTAAT
GTTCAGCGTC AGGCACGCTT AAAAATGCCC GAGTTAACCG CTGTACAACG GCTCCTGAAT
TACAGTGAGG TAGAACTAGG ATTCGCACCT GATGCGGCCA TGAAAGAGGC GGCACGCTGT
TTAGAATGTG CCTGTCAGGC CAATACAAAT TGCAAACTAA GAGATTATGC GACTGACTAC
AAAGTTGAAT CAAAACAACT AAACACCGAT TTTGCTCGTC AATTTGTGGT TGATAAATCA
AGCCCTTTTA TCCAATTTGA TGCCAATCGC TGTATCAGTT GCGGTAAATG TGTGGATGCG
TGCAACCAAC AAAGTGGGCA CTGCGTCATT CAATTTGCCT ATGATTCTTA CCAAGCACTC
CCCCAAACGG AAGATCTGAC CCAAGAACGC CGCGCCCCCA GAGTCGGCTT TAGTGCATCC
ATGGCGGATA GCCAATGTGT TCAATGTGGT AATTGCGTCC AAGTTTGCCC TACAGGTGCC
TTAGTTGACG CCCGAGACAA ACGCCAAGGG GATAAGACAT CACTCAAAAC CGCTTCCACT
ATCTGTACTT ACTGTGGTGT TGGATGCAGA CTCGACCTCA AAATCGATGA AAATACCCAT
CGCATCCGTC ATATCGAAGG TAATAAGGAC TCAGTCGTTA ACCAAGGTAT GTTGTGTGTT
AAAGGCCGTT TTGGTTTCGA TTTTATTCAC AGCGAAAAAC GCCTGACCAC TCCACTCATC
CGTAAAAACG GACAACTCCA GCCTTGTTCT TGGCAGGAGG CTATTGACTA TATCGCCAAA
AACTTGACCG ATATAAAGCA ACAATATGGC AGTAATGCGC TGGCCAGTCT CGCCTCCGCG
AAGGCCACAA ACGAAGATAA TTTTATACTG CAAAAGTTTG TCCGTAGTGT ACTTGGCACC
AACAATATCG ACCACTGCGC CCGCCTGTGC CACTCATCAA CCGTCACAGG CCTGCAACAA
AGTATTGGCA GCGGCGCTAT GACCAATGAT ATTCCGAGCA TCCAAGACTC TGATGTCATT
TTTATTTTAG GTTCAGATAC CACCAGCGCG CACCCCATTA TTGCGTCCAA GATAAAGCAG
GCGGTGACAT TACATGGGGC AAGATTAATC GTTGCCGATC CTAAACGTGT CGCTATTGCC
GATAACGCTG AACTCTATGT CGCCCAAAGG CCCGGCACGG ATGTGATGCT ACTCAATGCT
ATTATGGCGG AAATCATTCG TAACGAATGG CATGATAAAA CCTATATTGC CGAGCGCACA
GAAGGTGTGG ACGCTCTATA CGCGGAGCTT GCTAAGGATG ATTACTCCCT AGAAAACGCC
GCACTTATCA CTGGCGTTAA TGCAAGTGAA ATTGCCCAAC TCGCACGCAT CATCGGCACC
GCTGAAAAAA CAGCTATTTA CTATGCAATG GGGATCACTC AGCACACCAC AGGGCATGAC
AATGTTACCG CTATTTCTAA CCTGCAACTG TTGTGTGGCA ATATAGGTAT CAAAGGGGCG
GGGATTAATC CCCTACGTGG CCAAAGTAAT GTGCAGGGTG CTTGTGATAT GGGCGCACTA
CCTAACTATT TTACTGGCTA TCAAAAAGTG ACCGATATTC ATGCCAAAAT GCGCTTTGAG
GCCTATTGGC AAACTCCGCT CTCTGGTGAG ATTGGTGTTA CAGCAACCCA TATGATGCAT
GATATTTCCA AAGGGAAAAT CAAGGCGTTA TATGTAATGG GGGAAAATCC AGTATTAAGC
GACCCAGACC AAGCCCATGT GCTAAGGGCG CTTAACCAAA TAGATTTTCT CGTGGTGCAG
GATATCTTTC TAACTGAAAC CGCAGAACTA GCTCATGTCG TATTGCCAGC CGCCTCTTTT
GTGGAAAAAC GCGGTCACTT TACCAACACA GAACGACGGG TTCAGCGGCT TGAGCAAGCT
CTGCCCGCAC CAGGGGTAGC ATTGCCTGAT TGGCAGATTG TGCAGAAAAT TGCTAACGCG
ATGGGCGCGA ATTGGAATTA CATCCACGAA GAAGATATAT GGCATGAAAT TAATGAATTA
ACACCACAGT ATCGTGGTAT TCGTTGGCAA CGATTAAGTC AGCAGGATAA TGGTGACTTT
CCTCAAGGTA TTCAATGGCC CTGTCCAGAT GAAGACCATC CCGGAACCCC CATTATGCAC
CAAAACCAAT TTACACGCGG CTTAGGCAAA TTTACGCCTG TCAGTTACCG CTTACCCGCC
GAAATGCCCT GTAGTGAATA TCCACTAACA CTTTCAACTG GGCGATTATT GGAGCAATTT
CATACAGGTA CATTAACGCG TAAAACACCA GGACTCGATT TACTCGGCTC ACCTAAGGTG
ATGATTTCCG TCTATGATGC CGAGAGGCTC GGGATTAGTA ATGGCGATAA AATTAAACTC
ACGACACGCC GTGGTGAGAT TGAAATTGAT GCCTTTGTGA CTAAACGCGC CCAAGCTGGC
GTGCTATTCC TACCTTTCCA TTTTGTCGAA GCGGCAGCCA ATAAGCTCAC CATCAATGCC
CTTGATCCTG TTGCTTATAT TCCCGAATAT AAAGTGTGTG CAGTCAAAGC AGAAAAGGTA
ACGAGTTGCG GCTAA
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| Protein sequence | MIELQIDDQV LLVNPNNTLL QAAHNAGITI PSLCDQNAAS QQLVTDKHNQ KHDDKQSCNL
CVVQIENADA SLRCVRACET PVEMGMRVIT QSAYLSKKRK QALNNILSDH FADCEAPCQQ
ACPAGVDVQS YLYHIAQGNH TQAIKVIKQT LPLPLSIGRV CPAFCEAECR RGSVDEPIAI
RQLKRHAADL DLAEGENGGM SYVPERQAET GKRVAIIGAG PAGLSAGYYL SNQGHSVEIF
EAMPQAGGWL RYGIPEYRLP KAILDKEIDL LCRNGLMIHT QTRLGHEVHL TQLAKDFDAI
CLAIGAQKAV PMDYPGSTLK GCYLGVDYLK DHCLEKSLPL GKKVAVIGGG NTAIDCARTA
VREGCDVTLI YRRTRAEMPA EAYEVHEAEV EGVKFHFLTN PIENHSDADG HVCAVTFAKM
ALGEADASGR RAPINTGETF TQDFDTVIAA VSQTPDMSFL QDPASHLSQG EIALSRWNTF
IGCEHTMSAG IEKLFVIGDS RRGPATAVAA IGDGHKAAQA IDKMLKQGLS CELYSGEFNS
SKAVSHNSKQ DQIAQDLYPN VQRQARLKMP ELTAVQRLLN YSEVELGFAP DAAMKEAARC
LECACQANTN CKLRDYATDY KVESKQLNTD FARQFVVDKS SPFIQFDANR CISCGKCVDA
CNQQSGHCVI QFAYDSYQAL PQTEDLTQER RAPRVGFSAS MADSQCVQCG NCVQVCPTGA
LVDARDKRQG DKTSLKTAST ICTYCGVGCR LDLKIDENTH RIRHIEGNKD SVVNQGMLCV
KGRFGFDFIH SEKRLTTPLI RKNGQLQPCS WQEAIDYIAK NLTDIKQQYG SNALASLASA
KATNEDNFIL QKFVRSVLGT NNIDHCARLC HSSTVTGLQQ SIGSGAMTND IPSIQDSDVI
FILGSDTTSA HPIIASKIKQ AVTLHGARLI VADPKRVAIA DNAELYVAQR PGTDVMLLNA
IMAEIIRNEW HDKTYIAERT EGVDALYAEL AKDDYSLENA ALITGVNASE IAQLARIIGT
AEKTAIYYAM GITQHTTGHD NVTAISNLQL LCGNIGIKGA GINPLRGQSN VQGACDMGAL
PNYFTGYQKV TDIHAKMRFE AYWQTPLSGE IGVTATHMMH DISKGKIKAL YVMGENPVLS
DPDQAHVLRA LNQIDFLVVQ DIFLTETAEL AHVVLPAASF VEKRGHFTNT ERRVQRLEQA
LPAPGVALPD WQIVQKIANA MGANWNYIHE EDIWHEINEL TPQYRGIRWQ RLSQQDNGDF
PQGIQWPCPD EDHPGTPIMH QNQFTRGLGK FTPVSYRLPA EMPCSEYPLT LSTGRLLEQF
HTGTLTRKTP GLDLLGSPKV MISVYDAERL GISNGDKIKL TTRRGEIEID AFVTKRAQAG
VLFLPFHFVE AAANKLTINA LDPVAYIPEY KVCAVKAEKV TSCG
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