| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3045 |
|---|
| Symbol | |
|---|
| ID | 5079787 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 3527439 |
|---|
| End bp | 3528320 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640500243 |
|---|
| Product | phospholipase A(1) |
|---|
| Protein accession | YP_001184557 |
|---|
| Protein GI | 146294133 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2829] Outer membrane phospholipase A |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTGT TTTATAAAAA TATCCCGTTA ATAGGATTGC TAATGTGCTC AGGGCTAAAT
GCAGAATCAT TGGTAGAAGG ACGCGTTAAA GATGAACTTG CCACTGCAGA ACGTCCATTT
GTGATCACCC CGCATCATGT CAATTATTTA CTGCCAGCGA CCTATAATCC TGATCCTAAT
ATTGCTCCTT TTCTTGAAGA AATGGCTCAA GATCCCTATA CCTTAGATAA ATTTGAGGCT
AAGTTTCAGA TAAGCTTTAA ATTTCCGGTT TGGTACAACG TATTTGGTGA CAATGGGCAT
CTATTCTTTG CTTATACCAA TCAATCCTAT TGGCAAGTGT ATAACAAAGA AACCTCTTCA
CCCTTTCGCG AAACCAATCA CGAACCCGAA ATATTTATGC TGTTTAATAA CGATTGGAAA
ATTGGCAGTG TGACCAATTC TTTTTGGGGG TTTGGTGCGG TACATCAATC TAATGGTAAA
TCTGGCCTAC TTTCTCGAAG CTGGAATCGG ATTTATGGCA CCATGATTTT TGATGCCGGC
CCACTCGCTT TCGCGACCAA AATTTGGTGG CGTATTCCCG AAGATGAAAA AACCGATCCC
TATCAGGCAA GCGGTGATGA CAACCCAAAT ATTGAAGACT ATGTAGGCAA TGCCGAATTT
ATCGGTGTTT ATGGCGTTGA TGAACACAGA TTCACCCTCA CCCTCAGAAG CAATCTACAA
GATATCGATC GCGGCTCAGC AGAGCTCACG TGGAGCTATC CAATAGTGGG GAATTTACGT
CTGTATACCC AATATTTTAA TGGCTATGGA GAAAGTTTAA TCGACTACAA CTATCACAAC
CAACGTATTG GAATAGGGAT TTCGCTTAAT GACATCCTCT AA
|
|---|
| Protein sequence | MNLFYKNIPL IGLLMCSGLN AESLVEGRVK DELATAERPF VITPHHVNYL LPATYNPDPN
IAPFLEEMAQ DPYTLDKFEA KFQISFKFPV WYNVFGDNGH LFFAYTNQSY WQVYNKETSS
PFRETNHEPE IFMLFNNDWK IGSVTNSFWG FGAVHQSNGK SGLLSRSWNR IYGTMIFDAG
PLAFATKIWW RIPEDEKTDP YQASGDDNPN IEDYVGNAEF IGVYGVDEHR FTLTLRSNLQ
DIDRGSAELT WSYPIVGNLR LYTQYFNGYG ESLIDYNYHN QRIGIGISLN DIL
|
|---|
| |