| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3035 |
|---|
| Symbol | |
|---|
| ID | 5079777 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 3517043 |
|---|
| End bp | 3517687 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640500233 |
|---|
| Product | heat shock protein DnaJ domain-containing protein |
|---|
| Protein accession | YP_001184547 |
|---|
| Protein GI | 146294123 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTACTTG CTAAACCTTC GCTCAATGCA GAAGCACAAT CGGCAAGATT ATCCACCACC
AAAGGTGATA ATCCACTGAT TTGGCCCCTT CTCTCCGTAT TGCAAGCCTC TAATCAAAGC
TGGAAAATCC ACCACCTCGC GACTGAATTA CAAAGCAAAG GATTGATTCA TCCACTGGAT
GAGAATCCAG GTAACGATTT GTTTAAGCGA AACTTCTTAT TGATGAATGC CCTATTTGAG
TTACAAGAAA TCCTGCTTCC TCGGCAGTGG CTTCAAGTGA AGGCTATGGA TATTCAAATT
TTTCGTTTAG TACCATCCAA CGTCAATCTA CTGATGATGG AAGAAACATC GCTTAGAGAA
TATTACCTTG ACTGGAACAA CTACGACACA AGCGAAAACG TGGTCAGGGA GCTATTAGAA
GCCTTCTGGA CCAGTTACAA AAGCTATATT GGCCTTAACA TTAACCTCAT GAATAAAGGG
CATGCTCTTA GCGTATTTGA ATTAGATGAA AGCGCCACTG CGCGGGATAT TCGCAAGCAA
TGGCGCCGCT TGGCCCTTAA GTGGCACCCC GATAGACCAG ACGGCGATGC AGCAAGATTT
CGTGAAGTCT GTGAGGCTTG GCAATCACTA AGGGATATAG CCTAG
|
|---|
| Protein sequence | MLLAKPSLNA EAQSARLSTT KGDNPLIWPL LSVLQASNQS WKIHHLATEL QSKGLIHPLD
ENPGNDLFKR NFLLMNALFE LQEILLPRQW LQVKAMDIQI FRLVPSNVNL LMMEETSLRE
YYLDWNNYDT SENVVRELLE AFWTSYKSYI GLNINLMNKG HALSVFELDE SATARDIRKQ
WRRLALKWHP DRPDGDAARF REVCEAWQSL RDIA
|
|---|
| |