Gene Sputcn32_3029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3029 
Symbol 
ID5079771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp3512806 
End bp3513531 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content50% 
IMG OID640500227 
ProductABC transporter related 
Protein accessionYP_001184541 
Protein GI146294117 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTAAGA TAACCAACCT GCATAAAAAC TTCGGCGATA ACCAAGTGCT TAAGGGGATT 
AACGAGCATA TTCGGCTCGG CGAAGTGGTA AGTGTGATAG GCCCTAGCGG CAGCGGCAAG
AGTACCTTTT TGCGCTGTAT CAATCTGTTA GAGCAGCCAA GCCAAGGTGA TATCGAGATT
GAAGGTCAAT TGATCACAGC GCCAAACGCC TGCGTCGATA AACTGCGGCA AAAAGTGGGC
ATGGTGTTTC AAAACTTTAA TCTGTTCCCC CATAAAACAG TCATCCAAAA CATCACCTTA
GCGCCCATTA GTCTAAAACT GATGACGCCA GCTCAGGCCG AAAGCAAAGC CCTCGACCTA
CTGGCACAGG TTGGCTTAAG TGACAAAGCC AATGCCTATC CGGCCAGTTT ATCGGGCGGC
CAAAAGCAAA GGGTCGCCAT TGCCCGCGCA TTAGCGATGG AACCAGACTT GATGCTATTT
GATGAGCCGA CATCGGCACT CGATCCCGAA ATGGTCGGCG ATGTGCTCGA CGTGATGAAA
GACTTAGCGC TAAAGGGCAT GACCATGGTC ATTGTCACCC ACGAAATGGG CTTTGCCCGC
GATGTGTCCG ATCGAGTGAT CTTTATGGAC GGCGGTTATG TAGTCGAATC TAGTCCGCCA
GATGAGCTAT TCACCCACCC GAAAGAAGTC CGTACCCAAG CGTTTTTAAG CAAGGTATTG
CGTTAG
 
Protein sequence
MIKITNLHKN FGDNQVLKGI NEHIRLGEVV SVIGPSGSGK STFLRCINLL EQPSQGDIEI 
EGQLITAPNA CVDKLRQKVG MVFQNFNLFP HKTVIQNITL APISLKLMTP AQAESKALDL
LAQVGLSDKA NAYPASLSGG QKQRVAIARA LAMEPDLMLF DEPTSALDPE MVGDVLDVMK
DLALKGMTMV IVTHEMGFAR DVSDRVIFMD GGYVVESSPP DELFTHPKEV RTQAFLSKVL
R