Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3029 |
Symbol | |
ID | 5079771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 3512806 |
End bp | 3513531 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640500227 |
Product | ABC transporter related |
Protein accession | YP_001184541 |
Protein GI | 146294117 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGATTAAGA TAACCAACCT GCATAAAAAC TTCGGCGATA ACCAAGTGCT TAAGGGGATT AACGAGCATA TTCGGCTCGG CGAAGTGGTA AGTGTGATAG GCCCTAGCGG CAGCGGCAAG AGTACCTTTT TGCGCTGTAT CAATCTGTTA GAGCAGCCAA GCCAAGGTGA TATCGAGATT GAAGGTCAAT TGATCACAGC GCCAAACGCC TGCGTCGATA AACTGCGGCA AAAAGTGGGC ATGGTGTTTC AAAACTTTAA TCTGTTCCCC CATAAAACAG TCATCCAAAA CATCACCTTA GCGCCCATTA GTCTAAAACT GATGACGCCA GCTCAGGCCG AAAGCAAAGC CCTCGACCTA CTGGCACAGG TTGGCTTAAG TGACAAAGCC AATGCCTATC CGGCCAGTTT ATCGGGCGGC CAAAAGCAAA GGGTCGCCAT TGCCCGCGCA TTAGCGATGG AACCAGACTT GATGCTATTT GATGAGCCGA CATCGGCACT CGATCCCGAA ATGGTCGGCG ATGTGCTCGA CGTGATGAAA GACTTAGCGC TAAAGGGCAT GACCATGGTC ATTGTCACCC ACGAAATGGG CTTTGCCCGC GATGTGTCCG ATCGAGTGAT CTTTATGGAC GGCGGTTATG TAGTCGAATC TAGTCCGCCA GATGAGCTAT TCACCCACCC GAAAGAAGTC CGTACCCAAG CGTTTTTAAG CAAGGTATTG CGTTAG
|
Protein sequence | MIKITNLHKN FGDNQVLKGI NEHIRLGEVV SVIGPSGSGK STFLRCINLL EQPSQGDIEI EGQLITAPNA CVDKLRQKVG MVFQNFNLFP HKTVIQNITL APISLKLMTP AQAESKALDL LAQVGLSDKA NAYPASLSGG QKQRVAIARA LAMEPDLMLF DEPTSALDPE MVGDVLDVMK DLALKGMTMV IVTHEMGFAR DVSDRVIFMD GGYVVESSPP DELFTHPKEV RTQAFLSKVL R
|
| |