| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3028 |
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| Symbol | |
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| ID | 5079770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 3512133 |
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| End bp | 3512813 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640500226 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001184540 |
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| Protein GI | 146294116 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAGACG CAATTAATAC CTCGCTGTTT AGCCCGATTG GCGAAGATGG CATGATAGGC
ATACTGCTGA TATTAAATGG TTTGAAAGTG ACGTTAATCG TCACTTTCTT CGCCATGTTA
TTAGGCGCAG TGTTAGGCAT TGGCACCACC TTTATGAAGA TGTCGTCTAA GTGGTATATC
CGCTTCCCCG CCAATCTTTA TGTCGGTGTG ATCCGTGGCA CCCCAGTAGT TGTGCAATTA
GTGATCCTTT ACTTCATCGT GCTTTCAGCC TTAGATGTCG ATAAGATCAC TGCCGCCATT
ATCGCTTTTG GTCTCAATAG CGGTGCCTAT ATTTCTGAGA TTATCCGCGC GGGTATTCAA
GCCGTCGATA AAGGCCAAAC CGAAGCGGCG CGTTCACTCG GTTTGTCCCA AGCCATAACC
ATGAAGTCGA TTATTCTGCC CCAAGCGATT AAGAATATTC TGCCAGCACT GGGTAATGAG
TTTATCGTGC TCCTCAAAGA AACCGCCGTA ATAGGCTTTA TCGGTGGCGT TGACCTTATG
CGCGCCGGTG AAATTATTCG TAGTCGGACC TTCGAGGACA GCGTGCCACT GTTTACCTGC
GCCCTCATCT ATCTATTCCT GACCTACAGC TTCACCTTTA TGCTGTCGAA ATTTGAAAAG
AGGTTGAAAC AAAGTGATTA A
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| Protein sequence | MIDAINTSLF SPIGEDGMIG ILLILNGLKV TLIVTFFAML LGAVLGIGTT FMKMSSKWYI
RFPANLYVGV IRGTPVVVQL VILYFIVLSA LDVDKITAAI IAFGLNSGAY ISEIIRAGIQ
AVDKGQTEAA RSLGLSQAIT MKSIILPQAI KNILPALGNE FIVLLKETAV IGFIGGVDLM
RAGEIIRSRT FEDSVPLFTC ALIYLFLTYS FTFMLSKFEK RLKQSD
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