| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3024 |
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| Symbol | |
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| ID | 5079766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3508797 |
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| End bp | 3509516 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640500222 |
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| Product | LrgB family protein |
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| Protein accession | YP_001184536 |
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| Protein GI | 146294112 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1346] Putative effector of murein hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGATT CAAAAGTGAT GGATTTTCTA ATGTCGCAAA CAGTTTTAGC CTTAATCAGT
TTATTGTTAA CGGTATTTTG TTACTACGGA GCTAAAAGTT TATACAAGCA CCATAAAGTA
TGGTGGCTTG CACCCATAGT ATTTGCGCCT GTGATGATCA TTTTGCTGGT GTTTAATCTA
GACATTCCAT TACCCACTTA TTTTGAATAT ACCCATTGGT TGATGGCGAT GTTAGCTCCC
GCAACAATTG CTTTTGCACT GCCTATTTAC CGTGAGCGCA AATTAATCTG TCAGTATCCA
CTCACTATCA CCCTTGGTGT TGTTGCTGGA TTATTTTTGG GAATGATATC AACGTGGTTG
CTCGTCAAAT TTATTCCTTT ACCTGCCGAG CTTTCTAAAA GTTTATTAGT TCGTTCGGTT
TCAACCCCCT TTGCTATGGA GGCAACGAGC GCCTTTGGTG GTGTGCCAGA GCTGACCGCT
ATGATGGTAC TGATCACGGG GATTATTGGG ATGTTAGTGT GCGAACCCTT ATTTAAACTA
ATGCGCATTC GTACTTCTTT AGGTAAAGGG GTTGCACTGG GAGCTTCCGC CCATGGTGCC
GGCGCGGCTA AAGCGACTGA GCTTGGTCAG CAAGAAGGCG TAATAGCGAG TTTAACCATG
ATCTTTATCG GTATTGCTAT GGTATTAGGG GCGCCCGTTT TTGCGCTGAT TTTTATTTAG
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| Protein sequence | MADSKVMDFL MSQTVLALIS LLLTVFCYYG AKSLYKHHKV WWLAPIVFAP VMIILLVFNL
DIPLPTYFEY THWLMAMLAP ATIAFALPIY RERKLICQYP LTITLGVVAG LFLGMISTWL
LVKFIPLPAE LSKSLLVRSV STPFAMEATS AFGGVPELTA MMVLITGIIG MLVCEPLFKL
MRIRTSLGKG VALGASAHGA GAAKATELGQ QEGVIASLTM IFIGIAMVLG APVFALIFI
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