Gene Sputcn32_3019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3019 
Symbol 
ID5079761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp3501588 
End bp3502484 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content44% 
IMG OID640500217 
Producthypothetical protein 
Protein accessionYP_001184531 
Protein GI146294107 
COG category[S] Function unknown 
COG ID[COG1801] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGTCAC ATCAAAGCTG GCAAGACAGT GTTTACGGCC ATCAAACTAA AGCAACAGAA 
CGGCTCGCAC ACTATGCTCA TATTTTCAAT TCTGTTGAAG GTAATACCAG TTTTTATGCC
ACTCCAGCAC CACAAACCGT TTTAAATTGG CACAGTGCGA CTCCCGATAA TTTTCGCTTC
ACGTTCAAAT TGCCTCAACG TATTACCCAT CAGAAACAGC TTCAAGATTG TAATCAAGAT
CTGCGGGATT TTTTCCATAT TATGGCGCCA TTAATCGAGA AAACAGGCAT ATGGAAAATC
CAACTCCCCG CTCATTTTGG GCCTGAACAA CTTCCAGTAT TGGCACGATT TTTAGATCAC
GTTCCCCAAG GATTGACCTA TGGCGTCGAA GTCAGGCACT TTGCATTTTT TGCCAAAGGT
GATGCAGAGC GAACACTCAA TCGATTGTTA ATAGATAAAA AAGTCAATCG AATCATTATG
GATAGCCGAC CCGTATTTGC CCTACCGCCT TTCAATGAAA CCATTATTGA TGCCCACAAG
AAAAAACCAC GAGTTCCAGT GCACCCAATA GCCACAGCGA ATAATCCCGT TGTACGCTTT
ATCGGCCAAG CCGACGGTAC GCTGGCTCTG CTGACACAAC TCGGAACCAC AGCTTTACCT
AAGGATAATG ATGCCTTTTT TACCCATTGG CTTAAGCAAC TCACACTCTG GTTGAACGAA
GGCCGTGAGC CCTACTTATT TATTCATACC CCAGATAATC AAACTGCACC TGAACTCGCC
GCTCGTTTAT ATCGCAAACT GCAGCTCCAC ATTGCAGAGC ACATTCAACT CGCCGACATC
AAACTGCTTG AGAAAAAAGC AGAGGAAAAG AGTGCACAAA TGGGGTTAGA TTGGTGA
 
Protein sequence
MWSHQSWQDS VYGHQTKATE RLAHYAHIFN SVEGNTSFYA TPAPQTVLNW HSATPDNFRF 
TFKLPQRITH QKQLQDCNQD LRDFFHIMAP LIEKTGIWKI QLPAHFGPEQ LPVLARFLDH
VPQGLTYGVE VRHFAFFAKG DAERTLNRLL IDKKVNRIIM DSRPVFALPP FNETIIDAHK
KKPRVPVHPI ATANNPVVRF IGQADGTLAL LTQLGTTALP KDNDAFFTHW LKQLTLWLNE
GREPYLFIHT PDNQTAPELA ARLYRKLQLH IAEHIQLADI KLLEKKAEEK SAQMGLDW